Gene : Tp57577_TGAC_v2_gene24696 T. pratense v2
Defline:  (1 of 1) KOG0105//KOG0106//KOG0121//KOG0131//KOG0144 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene24696 Secondary Identifier:  ? PAC:35967793
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24696 0.5kb upstream 0.5kb upstream 2889 true Tp57577_TGAC_v2_scaf_930: 16478-19366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_930: 16478-16977 Trifolium pratense
Tp57577_TGAC_v2_gene24696 0.5kb downstream 0.5kb downstream 2889 true Tp57577_TGAC_v2_scaf_930: 16978-19866 Trifolium pratense
Tp57577_TGAC_v2_gene24696 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_930: 19367-19866 Trifolium pratense
Tp57577_TGAC_v2_gene24696 1.0kb upstream 1.0kb upstream 3389 true Tp57577_TGAC_v2_scaf_930: 15978-19366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_930: 15978-16977 Trifolium pratense
Tp57577_TGAC_v2_gene24696 1.0kb downstream 1.0kb downstream 3389 true Tp57577_TGAC_v2_scaf_930: 16978-20366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_930: 19367-20366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 2.0kb upstream 2.0kb upstream 4389 true Tp57577_TGAC_v2_scaf_930: 14978-19366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_930: 14978-16977 Trifolium pratense
Tp57577_TGAC_v2_gene24696 2.0kb downstream 2.0kb downstream 4389 true Tp57577_TGAC_v2_scaf_930: 16978-21366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_930: 19367-21366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 5.0kb upstream 5.0kb upstream 7389 true Tp57577_TGAC_v2_scaf_930: 11978-19366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_930: 11978-16977 Trifolium pratense
Tp57577_TGAC_v2_gene24696 5.0kb downstream 5.0kb downstream 7389 true Tp57577_TGAC_v2_scaf_930: 16978-24366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_930: 19367-24366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 10.0kb upstream 10.0kb upstream 12389 true Tp57577_TGAC_v2_scaf_930: 6978-19366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_930: 6978-16977 Trifolium pratense
Tp57577_TGAC_v2_gene24696 10.0kb downstream 10.0kb downstream 12389 true Tp57577_TGAC_v2_scaf_930: 16978-29366 Trifolium pratense
Tp57577_TGAC_v2_gene24696 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_930: 19367-29366 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040882 5273 Angiosperm View MSA
122300715 5265 Fabidae View MSA
124066117 5270 Rosid View MSA
123752208 5271 Pentapetalae View MSA
122797685 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain