Gene : Tp57577_TGAC_v2_gene1904 T. pratense v2
Defline:  (1 of 1) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  1704
Name:  ? Tp57577_TGAC_v2_gene1904 Secondary Identifier:  ? PAC:35979596
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ARO-PWY Trifolium pratense pathologic  
Tpratense PWY-6163 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1904 0.5kb upstream 0.5kb upstream 7500 true Tp57577_TGAC_v2_LG1: 13999592-14007091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 13999592-14000091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 0.5kb downstream 0.5kb downstream 7500 true Tp57577_TGAC_v2_LG1: 14000092-14007591 Trifolium pratense
Tp57577_TGAC_v2_gene1904 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 14007092-14007591 Trifolium pratense
Tp57577_TGAC_v2_gene1904 1.0kb upstream 1.0kb upstream 8000 true Tp57577_TGAC_v2_LG1: 13999092-14007091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 13999092-14000091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 1.0kb downstream 1.0kb downstream 8000 true Tp57577_TGAC_v2_LG1: 14000092-14008091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 14007092-14008091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 2.0kb upstream 2.0kb upstream 9000 true Tp57577_TGAC_v2_LG1: 13998092-14007091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 13998092-14000091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 2.0kb downstream 2.0kb downstream 9000 true Tp57577_TGAC_v2_LG1: 14000092-14009091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 14007092-14009091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 5.0kb upstream 5.0kb upstream 12000 true Tp57577_TGAC_v2_LG1: 13995092-14007091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 13995092-14000091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 5.0kb downstream 5.0kb downstream 12000 true Tp57577_TGAC_v2_LG1: 14000092-14012091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 14007092-14012091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 10.0kb upstream 10.0kb upstream 17000 true Tp57577_TGAC_v2_LG1: 13990092-14007091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 13990092-14000091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 10.0kb downstream 10.0kb downstream 17000 true Tp57577_TGAC_v2_LG1: 14000092-14017091 Trifolium pratense
Tp57577_TGAC_v2_gene1904 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 14007092-14017091 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
122305453 5265 Fabidae View MSA
124061876 5270 Rosid View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain