Gene : Tp57577_TGAC_v2_gene15400 T. pratense v2
Defline:  (1 of 2) PTHR31852:SF1 - LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene15400 Secondary Identifier:  ? PAC:35986377
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15400 0.5kb upstream 0.5kb upstream 1652 true Tp57577_TGAC_v2_scaf_584: 63764-65415 Trifolium pratense
Tp57577_TGAC_v2_gene15400 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_584: 64916-65415 Trifolium pratense
Tp57577_TGAC_v2_gene15400 0.5kb downstream 0.5kb downstream 1652 true Tp57577_TGAC_v2_scaf_584: 63264-64915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_584: 63264-63763 Trifolium pratense
Tp57577_TGAC_v2_gene15400 1.0kb upstream 1.0kb upstream 2152 true Tp57577_TGAC_v2_scaf_584: 63764-65915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_584: 64916-65915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 1.0kb downstream 1.0kb downstream 2152 true Tp57577_TGAC_v2_scaf_584: 62764-64915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_584: 62764-63763 Trifolium pratense
Tp57577_TGAC_v2_gene15400 2.0kb upstream 2.0kb upstream 3152 true Tp57577_TGAC_v2_scaf_584: 63764-66915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_584: 64916-66915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 2.0kb downstream 2.0kb downstream 3152 true Tp57577_TGAC_v2_scaf_584: 61764-64915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_584: 61764-63763 Trifolium pratense
Tp57577_TGAC_v2_gene15400 5.0kb upstream 5.0kb upstream 6152 true Tp57577_TGAC_v2_scaf_584: 63764-69915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_584: 64916-69915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 5.0kb downstream 5.0kb downstream 6152 true Tp57577_TGAC_v2_scaf_584: 58764-64915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_584: 58764-63763 Trifolium pratense
Tp57577_TGAC_v2_gene15400 10.0kb upstream 10.0kb upstream 11152 true Tp57577_TGAC_v2_scaf_584: 63764-74915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_584: 64916-74915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 10.0kb downstream 10.0kb downstream 11152 true Tp57577_TGAC_v2_scaf_584: 53764-64915 Trifolium pratense
Tp57577_TGAC_v2_gene15400 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_584: 53764-63763 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313282 5265 Fabidae View MSA
124063776 5270 Rosid View MSA
123751487 5271 Pentapetalae View MSA
122787858 5272 Eudicot View MSA
122044505 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain