Gene : Tp57577_TGAC_v2_gene15393 T. pratense v2
Defline:  (1 of 1) K05663 - mitochondrial ABC transporter ATM (ABC.ATM) Genomic Order:  12
Name:  ? Tp57577_TGAC_v2_gene15393 Secondary Identifier:  ? PAC:35986379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15393 0.5kb upstream 0.5kb upstream 11056 true Tp57577_TGAC_v2_scaf_584: 127104-138159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_584: 127104-127603 Trifolium pratense
Tp57577_TGAC_v2_gene15393 0.5kb downstream 0.5kb downstream 11056 true Tp57577_TGAC_v2_scaf_584: 127604-138659 Trifolium pratense
Tp57577_TGAC_v2_gene15393 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_584: 138160-138659 Trifolium pratense
Tp57577_TGAC_v2_gene15393 1.0kb upstream 1.0kb upstream 11556 true Tp57577_TGAC_v2_scaf_584: 126604-138159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_584: 126604-127603 Trifolium pratense
Tp57577_TGAC_v2_gene15393 1.0kb downstream 1.0kb downstream 11556 true Tp57577_TGAC_v2_scaf_584: 127604-139159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_584: 138160-139159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 2.0kb upstream 2.0kb upstream 12556 true Tp57577_TGAC_v2_scaf_584: 125604-138159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_584: 125604-127603 Trifolium pratense
Tp57577_TGAC_v2_gene15393 2.0kb downstream 2.0kb downstream 12556 true Tp57577_TGAC_v2_scaf_584: 127604-140159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_584: 138160-140159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 5.0kb upstream 5.0kb upstream 15556 true Tp57577_TGAC_v2_scaf_584: 122604-138159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_584: 122604-127603 Trifolium pratense
Tp57577_TGAC_v2_gene15393 5.0kb downstream 5.0kb downstream 15556 true Tp57577_TGAC_v2_scaf_584: 127604-143159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_584: 138160-143159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 10.0kb upstream 10.0kb upstream 20556 true Tp57577_TGAC_v2_scaf_584: 117604-138159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_584: 117604-127603 Trifolium pratense
Tp57577_TGAC_v2_gene15393 10.0kb downstream 10.0kb downstream 20556 true Tp57577_TGAC_v2_scaf_584: 127604-148159 Trifolium pratense
Tp57577_TGAC_v2_gene15393 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_584: 138160-148159 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041097 5273 Angiosperm View MSA
122300552 5265 Fabidae View MSA
124060487 5270 Rosid View MSA
123750539 5271 Pentapetalae View MSA
122787289 5272 Eudicot View MSA
121345218 5274 Embryophyte View MSA
123424438 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain