Gene : Tp57577_TGAC_v2_gene23092 T. pratense v2

Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene23092 Secondary Identifier:  ? PAC:35967195

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLYCLEAV-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23092 0.5kb upstream 0.5kb upstream 5306 true Tp57577_TGAC_v2_scaf_999: 37706-43011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_999: 37706-38205 Trifolium pratense
Tp57577_TGAC_v2_gene23092 0.5kb downstream 0.5kb downstream 5306 true Tp57577_TGAC_v2_scaf_999: 38206-43511 Trifolium pratense
Tp57577_TGAC_v2_gene23092 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_999: 43012-43511 Trifolium pratense
Tp57577_TGAC_v2_gene23092 1.0kb upstream 1.0kb upstream 5806 true Tp57577_TGAC_v2_scaf_999: 37206-43011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_999: 37206-38205 Trifolium pratense
Tp57577_TGAC_v2_gene23092 1.0kb downstream 1.0kb downstream 5806 true Tp57577_TGAC_v2_scaf_999: 38206-44011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_999: 43012-44011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 2.0kb upstream 2.0kb upstream 6806 true Tp57577_TGAC_v2_scaf_999: 36206-43011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_999: 36206-38205 Trifolium pratense
Tp57577_TGAC_v2_gene23092 2.0kb downstream 2.0kb downstream 6806 true Tp57577_TGAC_v2_scaf_999: 38206-45011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_999: 43012-45011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 5.0kb upstream 5.0kb upstream 9806 true Tp57577_TGAC_v2_scaf_999: 33206-43011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_999: 33206-38205 Trifolium pratense
Tp57577_TGAC_v2_gene23092 5.0kb downstream 5.0kb downstream 9806 true Tp57577_TGAC_v2_scaf_999: 38206-48011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_999: 43012-48011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 10.0kb upstream 10.0kb upstream 14806 true Tp57577_TGAC_v2_scaf_999: 28206-43011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_999: 28206-38205 Trifolium pratense
Tp57577_TGAC_v2_gene23092 10.0kb downstream 10.0kb downstream 14806 true Tp57577_TGAC_v2_scaf_999: 38206-53011 Trifolium pratense
Tp57577_TGAC_v2_gene23092 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_999: 43012-53011 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307093 5265 Fabidae View MSA
124066911 5270 Rosid View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain