Gene : Tp57577_TGAC_v2_gene28987 T. pratense v2
Defline:  (1 of 3) PF01453//PF07714 - D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene28987 Secondary Identifier:  ? PAC:35985305
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28987 0.5kb upstream 0.5kb upstream 3574 true Tp57577_TGAC_v2_scaf_836: 39606-43179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_836: 39606-40105 Trifolium pratense
Tp57577_TGAC_v2_gene28987 0.5kb downstream 0.5kb downstream 3574 true Tp57577_TGAC_v2_scaf_836: 40106-43679 Trifolium pratense
Tp57577_TGAC_v2_gene28987 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_836: 43180-43679 Trifolium pratense
Tp57577_TGAC_v2_gene28987 1.0kb upstream 1.0kb upstream 4074 true Tp57577_TGAC_v2_scaf_836: 39106-43179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_836: 39106-40105 Trifolium pratense
Tp57577_TGAC_v2_gene28987 1.0kb downstream 1.0kb downstream 4074 true Tp57577_TGAC_v2_scaf_836: 40106-44179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_836: 43180-44179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 2.0kb upstream 2.0kb upstream 5074 true Tp57577_TGAC_v2_scaf_836: 38106-43179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_836: 38106-40105 Trifolium pratense
Tp57577_TGAC_v2_gene28987 2.0kb downstream 2.0kb downstream 5074 true Tp57577_TGAC_v2_scaf_836: 40106-45179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_836: 43180-45179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 5.0kb upstream 5.0kb upstream 8074 true Tp57577_TGAC_v2_scaf_836: 35106-43179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_836: 35106-40105 Trifolium pratense
Tp57577_TGAC_v2_gene28987 5.0kb downstream 5.0kb downstream 8074 true Tp57577_TGAC_v2_scaf_836: 40106-48179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_836: 43180-48179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 10.0kb upstream 10.0kb upstream 13074 true Tp57577_TGAC_v2_scaf_836: 30106-43179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_836: 30106-40105 Trifolium pratense
Tp57577_TGAC_v2_gene28987 10.0kb downstream 10.0kb downstream 13074 true Tp57577_TGAC_v2_scaf_836: 40106-53179 Trifolium pratense
Tp57577_TGAC_v2_gene28987 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_836: 43180-53179 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312394 5265 Fabidae View MSA
124074422 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain