Gene : Tp57577_TGAC_v2_gene31855 T. pratense v2
Defline:  (1 of 2) 2.7.7.15 - Choline-phosphate cytidylyltransferase / Phosphorylcholine transferase Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene31855 Secondary Identifier:  ? PAC:35977895
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-3561 Trifolium pratense pathologic  
Tpratense PWY3O-450 Trifolium pratense pathologic  
Tpratense PWY4FS-2 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene31855 0.5kb upstream 0.5kb upstream 4349 true Tp57577_TGAC_v2_scaf_709: 62456-66804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_709: 62456-62955 Trifolium pratense
Tp57577_TGAC_v2_gene31855 0.5kb downstream 0.5kb downstream 4349 true Tp57577_TGAC_v2_scaf_709: 62956-67304 Trifolium pratense
Tp57577_TGAC_v2_gene31855 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_709: 66805-67304 Trifolium pratense
Tp57577_TGAC_v2_gene31855 1.0kb upstream 1.0kb upstream 4849 true Tp57577_TGAC_v2_scaf_709: 61956-66804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_709: 61956-62955 Trifolium pratense
Tp57577_TGAC_v2_gene31855 1.0kb downstream 1.0kb downstream 4849 true Tp57577_TGAC_v2_scaf_709: 62956-67804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_709: 66805-67804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 2.0kb upstream 2.0kb upstream 5849 true Tp57577_TGAC_v2_scaf_709: 60956-66804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_709: 60956-62955 Trifolium pratense
Tp57577_TGAC_v2_gene31855 2.0kb downstream 2.0kb downstream 5849 true Tp57577_TGAC_v2_scaf_709: 62956-68804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_709: 66805-68804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 5.0kb upstream 5.0kb upstream 8849 true Tp57577_TGAC_v2_scaf_709: 57956-66804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_709: 57956-62955 Trifolium pratense
Tp57577_TGAC_v2_gene31855 5.0kb downstream 5.0kb downstream 8849 true Tp57577_TGAC_v2_scaf_709: 62956-71804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_709: 66805-71804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 10.0kb upstream 10.0kb upstream 13849 true Tp57577_TGAC_v2_scaf_709: 52956-66804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_709: 52956-62955 Trifolium pratense
Tp57577_TGAC_v2_gene31855 10.0kb downstream 10.0kb downstream 13849 true Tp57577_TGAC_v2_scaf_709: 62956-76804 Trifolium pratense
Tp57577_TGAC_v2_gene31855 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_709: 66805-76804 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301864 5265 Fabidae View MSA
124069985 5270 Rosid View MSA
123749333 5271 Pentapetalae View MSA
122792398 5272 Eudicot View MSA
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain