Gene : Tp57577_TGAC_v2_gene18613 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1600
Name:  ? Tp57577_TGAC_v2_gene18613 Secondary Identifier:  ? PAC:35978512
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18613 0.5kb upstream 0.5kb upstream 4094 true Tp57577_TGAC_v2_LG1: 13233652-13237745 Trifolium pratense
Tp57577_TGAC_v2_gene18613 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 13237246-13237745 Trifolium pratense
Tp57577_TGAC_v2_gene18613 0.5kb downstream 0.5kb downstream 4094 true Tp57577_TGAC_v2_LG1: 13233152-13237245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 13233152-13233651 Trifolium pratense
Tp57577_TGAC_v2_gene18613 1.0kb upstream 1.0kb upstream 4594 true Tp57577_TGAC_v2_LG1: 13233652-13238245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 13237246-13238245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 1.0kb downstream 1.0kb downstream 4594 true Tp57577_TGAC_v2_LG1: 13232652-13237245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 13232652-13233651 Trifolium pratense
Tp57577_TGAC_v2_gene18613 2.0kb upstream 2.0kb upstream 5594 true Tp57577_TGAC_v2_LG1: 13233652-13239245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 13237246-13239245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 2.0kb downstream 2.0kb downstream 5594 true Tp57577_TGAC_v2_LG1: 13231652-13237245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 13231652-13233651 Trifolium pratense
Tp57577_TGAC_v2_gene18613 5.0kb upstream 5.0kb upstream 8594 true Tp57577_TGAC_v2_LG1: 13233652-13242245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 13237246-13242245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 5.0kb downstream 5.0kb downstream 8594 true Tp57577_TGAC_v2_LG1: 13228652-13237245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 13228652-13233651 Trifolium pratense
Tp57577_TGAC_v2_gene18613 10.0kb upstream 10.0kb upstream 13594 true Tp57577_TGAC_v2_LG1: 13233652-13247245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 13237246-13247245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 10.0kb downstream 10.0kb downstream 13594 true Tp57577_TGAC_v2_LG1: 13223652-13237245 Trifolium pratense
Tp57577_TGAC_v2_gene18613 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 13223652-13233651 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300852 5265 Fabidae View MSA
124064128 5270 Rosid View MSA
123740328 5271 Pentapetalae View MSA
122789927 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain