Gene : Tp57577_TGAC_v2_gene25990 T. pratense v2
Defline:  (1 of 1) K00766 - anthranilate phosphoribosyltransferase (trpD) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene25990 Secondary Identifier:  ? PAC:35953041
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRPSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25990 0.5kb upstream 0.5kb upstream 7617 true Tp57577_TGAC_v2_scaf_916: 35530-43146 Trifolium pratense
Tp57577_TGAC_v2_gene25990 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_916: 42647-43146 Trifolium pratense
Tp57577_TGAC_v2_gene25990 0.5kb downstream 0.5kb downstream 7617 true Tp57577_TGAC_v2_scaf_916: 35030-42646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_916: 35030-35529 Trifolium pratense
Tp57577_TGAC_v2_gene25990 1.0kb upstream 1.0kb upstream 8117 true Tp57577_TGAC_v2_scaf_916: 35530-43646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_916: 42647-43646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 1.0kb downstream 1.0kb downstream 8117 true Tp57577_TGAC_v2_scaf_916: 34530-42646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_916: 34530-35529 Trifolium pratense
Tp57577_TGAC_v2_gene25990 2.0kb upstream 2.0kb upstream 9117 true Tp57577_TGAC_v2_scaf_916: 35530-44646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_916: 42647-44646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 2.0kb downstream 2.0kb downstream 9117 true Tp57577_TGAC_v2_scaf_916: 33530-42646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_916: 33530-35529 Trifolium pratense
Tp57577_TGAC_v2_gene25990 5.0kb upstream 5.0kb upstream 12117 true Tp57577_TGAC_v2_scaf_916: 35530-47646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_916: 42647-47646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 5.0kb downstream 5.0kb downstream 12117 true Tp57577_TGAC_v2_scaf_916: 30530-42646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_916: 30530-35529 Trifolium pratense
Tp57577_TGAC_v2_gene25990 10.0kb upstream 10.0kb upstream 17117 true Tp57577_TGAC_v2_scaf_916: 35530-52646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_916: 42647-52646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 10.0kb downstream 10.0kb downstream 17117 true Tp57577_TGAC_v2_scaf_916: 25530-42646 Trifolium pratense
Tp57577_TGAC_v2_gene25990 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_916: 25530-35529 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306969 5265 Fabidae View MSA
124063634 5270 Rosid View MSA
123740526 5271 Pentapetalae View MSA
122797383 5272 Eudicot View MSA
122046938 5273 Angiosperm View MSA
121344269 5274 Embryophyte View MSA
123424710 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain