Gene : Tp57577_TGAC_v2_gene16922 T. pratense v2
Defline:  (1 of 3) PTHR13268:SF2 - AUTOPHAGY-RELATED PROTEIN 18G Genomic Order:  578
Name:  ? Tp57577_TGAC_v2_gene16922 Secondary Identifier:  ? PAC:35980977
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16922 0.5kb upstream 0.5kb upstream 6294 true Tp57577_TGAC_v2_LG1: 4403258-4409551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 4403258-4403757 Trifolium pratense
Tp57577_TGAC_v2_gene16922 0.5kb downstream 0.5kb downstream 6294 true Tp57577_TGAC_v2_LG1: 4403758-4410051 Trifolium pratense
Tp57577_TGAC_v2_gene16922 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 4409552-4410051 Trifolium pratense
Tp57577_TGAC_v2_gene16922 1.0kb upstream 1.0kb upstream 6794 true Tp57577_TGAC_v2_LG1: 4402758-4409551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 4402758-4403757 Trifolium pratense
Tp57577_TGAC_v2_gene16922 1.0kb downstream 1.0kb downstream 6794 true Tp57577_TGAC_v2_LG1: 4403758-4410551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 4409552-4410551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 2.0kb upstream 2.0kb upstream 7794 true Tp57577_TGAC_v2_LG1: 4401758-4409551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 4401758-4403757 Trifolium pratense
Tp57577_TGAC_v2_gene16922 2.0kb downstream 2.0kb downstream 7794 true Tp57577_TGAC_v2_LG1: 4403758-4411551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 4409552-4411551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 5.0kb upstream 5.0kb upstream 10794 true Tp57577_TGAC_v2_LG1: 4398758-4409551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 4398758-4403757 Trifolium pratense
Tp57577_TGAC_v2_gene16922 5.0kb downstream 5.0kb downstream 10794 true Tp57577_TGAC_v2_LG1: 4403758-4414551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 4409552-4414551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 10.0kb upstream 10.0kb upstream 15794 true Tp57577_TGAC_v2_LG1: 4393758-4409551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 4393758-4403757 Trifolium pratense
Tp57577_TGAC_v2_gene16922 10.0kb downstream 10.0kb downstream 15794 true Tp57577_TGAC_v2_LG1: 4403758-4419551 Trifolium pratense
Tp57577_TGAC_v2_gene16922 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 4409552-4419551 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305395 5265 Fabidae View MSA
124066220 5270 Rosid View MSA
123744735 5271 Pentapetalae View MSA
122790134 5272 Eudicot View MSA
122047922 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain