Gene : Tp57577_TGAC_v2_gene16935 T. pratense v2
Defline:  (1 of 1) PTHR23083//PTHR23083:SF380 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Genomic Order:  579
Name:  ? Tp57577_TGAC_v2_gene16935 Secondary Identifier:  ? PAC:35978736
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16935 0.5kb upstream 0.5kb upstream 3467 true Tp57577_TGAC_v2_LG1: 4412238-4415704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 4412238-4412737 Trifolium pratense
Tp57577_TGAC_v2_gene16935 0.5kb downstream 0.5kb downstream 3467 true Tp57577_TGAC_v2_LG1: 4412738-4416204 Trifolium pratense
Tp57577_TGAC_v2_gene16935 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 4415705-4416204 Trifolium pratense
Tp57577_TGAC_v2_gene16935 1.0kb upstream 1.0kb upstream 3967 true Tp57577_TGAC_v2_LG1: 4411738-4415704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 4411738-4412737 Trifolium pratense
Tp57577_TGAC_v2_gene16935 1.0kb downstream 1.0kb downstream 3967 true Tp57577_TGAC_v2_LG1: 4412738-4416704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 4415705-4416704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 2.0kb upstream 2.0kb upstream 4967 true Tp57577_TGAC_v2_LG1: 4410738-4415704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 4410738-4412737 Trifolium pratense
Tp57577_TGAC_v2_gene16935 2.0kb downstream 2.0kb downstream 4967 true Tp57577_TGAC_v2_LG1: 4412738-4417704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 4415705-4417704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 5.0kb upstream 5.0kb upstream 7967 true Tp57577_TGAC_v2_LG1: 4407738-4415704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 4407738-4412737 Trifolium pratense
Tp57577_TGAC_v2_gene16935 5.0kb downstream 5.0kb downstream 7967 true Tp57577_TGAC_v2_LG1: 4412738-4420704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 4415705-4420704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 10.0kb upstream 10.0kb upstream 12967 true Tp57577_TGAC_v2_LG1: 4402738-4415704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 4402738-4412737 Trifolium pratense
Tp57577_TGAC_v2_gene16935 10.0kb downstream 10.0kb downstream 12967 true Tp57577_TGAC_v2_LG1: 4412738-4425704 Trifolium pratense
Tp57577_TGAC_v2_gene16935 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 4415705-4425704 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303934 5265 Fabidae View MSA
124068399 5270 Rosid View MSA
123739608 5271 Pentapetalae View MSA
122792397 5272 Eudicot View MSA
122043324 5273 Angiosperm View MSA
121346107 5274 Embryophyte View MSA
123380332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain