Gene : Tp57577_TGAC_v2_gene8774 T. pratense v2
Defline:  (1 of 2) K17839 - polyamine oxidase (PAO4, PAO3, PAO2) Genomic Order:  25
Name:  ? Tp57577_TGAC_v2_gene8774 Secondary Identifier:  ? PAC:35953100
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6441 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8774 0.5kb upstream 0.5kb upstream 5449 true Tp57577_TGAC_v2_scaf_512: 153436-158884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_512: 153436-153935 Trifolium pratense
Tp57577_TGAC_v2_gene8774 0.5kb downstream 0.5kb downstream 5449 true Tp57577_TGAC_v2_scaf_512: 153936-159384 Trifolium pratense
Tp57577_TGAC_v2_gene8774 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_512: 158885-159384 Trifolium pratense
Tp57577_TGAC_v2_gene8774 1.0kb upstream 1.0kb upstream 5949 true Tp57577_TGAC_v2_scaf_512: 152936-158884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_512: 152936-153935 Trifolium pratense
Tp57577_TGAC_v2_gene8774 1.0kb downstream 1.0kb downstream 5949 true Tp57577_TGAC_v2_scaf_512: 153936-159884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_512: 158885-159884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 2.0kb upstream 2.0kb upstream 6949 true Tp57577_TGAC_v2_scaf_512: 151936-158884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_512: 151936-153935 Trifolium pratense
Tp57577_TGAC_v2_gene8774 2.0kb downstream 2.0kb downstream 6949 true Tp57577_TGAC_v2_scaf_512: 153936-160884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_512: 158885-160884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 5.0kb upstream 5.0kb upstream 9949 true Tp57577_TGAC_v2_scaf_512: 148936-158884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_512: 148936-153935 Trifolium pratense
Tp57577_TGAC_v2_gene8774 5.0kb downstream 5.0kb downstream 9949 true Tp57577_TGAC_v2_scaf_512: 153936-163884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_512: 158885-163884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 10.0kb upstream 10.0kb upstream 14949 true Tp57577_TGAC_v2_scaf_512: 143936-158884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_512: 143936-153935 Trifolium pratense
Tp57577_TGAC_v2_gene8774 10.0kb downstream 10.0kb downstream 14949 true Tp57577_TGAC_v2_scaf_512: 153936-168884 Trifolium pratense
Tp57577_TGAC_v2_gene8774 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_512: 158885-168884 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310798 5265 Fabidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain