Gene : Tp57577_TGAC_v2_gene9667 T. pratense v2
Defline:  (1 of 1) 4.2.1.122 - Tryptophan synthase (indole-salvaging) / Tryptophan synthase beta-2 Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene9667 Secondary Identifier:  ? PAC:35952268
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6949 Trifolium pratense pathologic  
Tpratense TRPSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9667 0.5kb upstream 0.5kb upstream 5593 true Tp57577_TGAC_v2_scaf_204: 89036-94628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_204: 89036-89535 Trifolium pratense
Tp57577_TGAC_v2_gene9667 0.5kb downstream 0.5kb downstream 5593 true Tp57577_TGAC_v2_scaf_204: 89536-95128 Trifolium pratense
Tp57577_TGAC_v2_gene9667 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_204: 94629-95128 Trifolium pratense
Tp57577_TGAC_v2_gene9667 1.0kb upstream 1.0kb upstream 6093 true Tp57577_TGAC_v2_scaf_204: 88536-94628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_204: 88536-89535 Trifolium pratense
Tp57577_TGAC_v2_gene9667 1.0kb downstream 1.0kb downstream 6093 true Tp57577_TGAC_v2_scaf_204: 89536-95628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_204: 94629-95628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 2.0kb upstream 2.0kb upstream 7093 true Tp57577_TGAC_v2_scaf_204: 87536-94628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_204: 87536-89535 Trifolium pratense
Tp57577_TGAC_v2_gene9667 2.0kb downstream 2.0kb downstream 7093 true Tp57577_TGAC_v2_scaf_204: 89536-96628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_204: 94629-96628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 5.0kb upstream 5.0kb upstream 10093 true Tp57577_TGAC_v2_scaf_204: 84536-94628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_204: 84536-89535 Trifolium pratense
Tp57577_TGAC_v2_gene9667 5.0kb downstream 5.0kb downstream 10093 true Tp57577_TGAC_v2_scaf_204: 89536-99628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_204: 94629-99628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 10.0kb upstream 10.0kb upstream 15093 true Tp57577_TGAC_v2_scaf_204: 79536-94628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_204: 79536-89535 Trifolium pratense
Tp57577_TGAC_v2_gene9667 10.0kb downstream 10.0kb downstream 15093 true Tp57577_TGAC_v2_scaf_204: 89536-104628 Trifolium pratense
Tp57577_TGAC_v2_gene9667 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_204: 94629-104628 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307865 5265 Fabidae View MSA
124065122 5270 Rosid View MSA
123740538 5271 Pentapetalae View MSA
122790993 5272 Eudicot View MSA
122043348 5273 Angiosperm View MSA
121348084 5274 Embryophyte View MSA
123380724 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain