Gene : Tp57577_TGAC_v2_gene17050 T. pratense v2
Defline:  (1 of 1) KOG4442 - Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis Genomic Order:  468
Name:  ? Tp57577_TGAC_v2_gene17050 Secondary Identifier:  ? PAC:35980619
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17050 0.5kb upstream 0.5kb upstream 5090 true Tp57577_TGAC_v2_LG1: 3536183-3541272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 3536183-3536682 Trifolium pratense
Tp57577_TGAC_v2_gene17050 0.5kb downstream 0.5kb downstream 5090 true Tp57577_TGAC_v2_LG1: 3536683-3541772 Trifolium pratense
Tp57577_TGAC_v2_gene17050 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 3541273-3541772 Trifolium pratense
Tp57577_TGAC_v2_gene17050 1.0kb upstream 1.0kb upstream 5590 true Tp57577_TGAC_v2_LG1: 3535683-3541272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 3535683-3536682 Trifolium pratense
Tp57577_TGAC_v2_gene17050 1.0kb downstream 1.0kb downstream 5590 true Tp57577_TGAC_v2_LG1: 3536683-3542272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 3541273-3542272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 2.0kb upstream 2.0kb upstream 6590 true Tp57577_TGAC_v2_LG1: 3534683-3541272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 3534683-3536682 Trifolium pratense
Tp57577_TGAC_v2_gene17050 2.0kb downstream 2.0kb downstream 6590 true Tp57577_TGAC_v2_LG1: 3536683-3543272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 3541273-3543272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 5.0kb upstream 5.0kb upstream 9590 true Tp57577_TGAC_v2_LG1: 3531683-3541272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 3531683-3536682 Trifolium pratense
Tp57577_TGAC_v2_gene17050 5.0kb downstream 5.0kb downstream 9590 true Tp57577_TGAC_v2_LG1: 3536683-3546272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 3541273-3546272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 10.0kb upstream 10.0kb upstream 14590 true Tp57577_TGAC_v2_LG1: 3526683-3541272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 3526683-3536682 Trifolium pratense
Tp57577_TGAC_v2_gene17050 10.0kb downstream 10.0kb downstream 14590 true Tp57577_TGAC_v2_LG1: 3536683-3551272 Trifolium pratense
Tp57577_TGAC_v2_gene17050 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 3541273-3551272 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297403 5265 Fabidae View MSA
124065473 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain