Gene : Tp57577_TGAC_v2_gene17046 T. pratense v2
Defline:  (1 of 3) PTHR22603:SF39 - CHOLINE KINASE 1-RELATED Genomic Order:  482
Name:  ? Tp57577_TGAC_v2_gene17046 Secondary Identifier:  ? PAC:35979469
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-3385 Trifolium pratense pathologic  
Tpratense PWY4FS-6 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17046 0.5kb upstream 0.5kb upstream 3166 true Tp57577_TGAC_v2_LG1: 3631133-3634298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 3631133-3631632 Trifolium pratense
Tp57577_TGAC_v2_gene17046 0.5kb downstream 0.5kb downstream 3166 true Tp57577_TGAC_v2_LG1: 3631633-3634798 Trifolium pratense
Tp57577_TGAC_v2_gene17046 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 3634299-3634798 Trifolium pratense
Tp57577_TGAC_v2_gene17046 1.0kb upstream 1.0kb upstream 3666 true Tp57577_TGAC_v2_LG1: 3630633-3634298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 3630633-3631632 Trifolium pratense
Tp57577_TGAC_v2_gene17046 1.0kb downstream 1.0kb downstream 3666 true Tp57577_TGAC_v2_LG1: 3631633-3635298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 3634299-3635298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 2.0kb upstream 2.0kb upstream 4666 true Tp57577_TGAC_v2_LG1: 3629633-3634298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 3629633-3631632 Trifolium pratense
Tp57577_TGAC_v2_gene17046 2.0kb downstream 2.0kb downstream 4666 true Tp57577_TGAC_v2_LG1: 3631633-3636298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 3634299-3636298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 5.0kb upstream 5.0kb upstream 7666 true Tp57577_TGAC_v2_LG1: 3626633-3634298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 3626633-3631632 Trifolium pratense
Tp57577_TGAC_v2_gene17046 5.0kb downstream 5.0kb downstream 7666 true Tp57577_TGAC_v2_LG1: 3631633-3639298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 3634299-3639298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 10.0kb upstream 10.0kb upstream 12666 true Tp57577_TGAC_v2_LG1: 3621633-3634298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 3621633-3631632 Trifolium pratense
Tp57577_TGAC_v2_gene17046 10.0kb downstream 10.0kb downstream 12666 true Tp57577_TGAC_v2_LG1: 3631633-3644298 Trifolium pratense
Tp57577_TGAC_v2_gene17046 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 3634299-3644298 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311650 5265 Fabidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain