Gene : Tp57577_TGAC_v2_gene10287 T. pratense v2
Defline:  (1 of 4) PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Genomic Order:  13
Name:  ? Tp57577_TGAC_v2_gene10287 Secondary Identifier:  ? PAC:35981789
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10287 0.5kb upstream 0.5kb upstream 4068 true Tp57577_TGAC_v2_scaf_566: 103377-107444 Trifolium pratense
Tp57577_TGAC_v2_gene10287 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_566: 106945-107444 Trifolium pratense
Tp57577_TGAC_v2_gene10287 0.5kb downstream 0.5kb downstream 4068 true Tp57577_TGAC_v2_scaf_566: 102877-106944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_566: 102877-103376 Trifolium pratense
Tp57577_TGAC_v2_gene10287 1.0kb upstream 1.0kb upstream 4568 true Tp57577_TGAC_v2_scaf_566: 103377-107944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_566: 106945-107944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 1.0kb downstream 1.0kb downstream 4568 true Tp57577_TGAC_v2_scaf_566: 102377-106944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_566: 102377-103376 Trifolium pratense
Tp57577_TGAC_v2_gene10287 2.0kb upstream 2.0kb upstream 5568 true Tp57577_TGAC_v2_scaf_566: 103377-108944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_566: 106945-108944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 2.0kb downstream 2.0kb downstream 5568 true Tp57577_TGAC_v2_scaf_566: 101377-106944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_566: 101377-103376 Trifolium pratense
Tp57577_TGAC_v2_gene10287 5.0kb upstream 5.0kb upstream 8568 true Tp57577_TGAC_v2_scaf_566: 103377-111944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_566: 106945-111944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 5.0kb downstream 5.0kb downstream 8568 true Tp57577_TGAC_v2_scaf_566: 98377-106944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_566: 98377-103376 Trifolium pratense
Tp57577_TGAC_v2_gene10287 10.0kb upstream 10.0kb upstream 13568 true Tp57577_TGAC_v2_scaf_566: 103377-116944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_566: 106945-116944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 10.0kb downstream 10.0kb downstream 13568 true Tp57577_TGAC_v2_scaf_566: 93377-106944 Trifolium pratense
Tp57577_TGAC_v2_gene10287 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_566: 93377-103376 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308231 5265 Fabidae View MSA
124065418 5270 Rosid View MSA
123739906 5271 Pentapetalae View MSA
122790994 5272 Eudicot View MSA
122042286 5273 Angiosperm View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain