Gene : Tp57577_TGAC_v2_gene17389 T. pratense v2
Defline:  (1 of 1) PTHR10584//PTHR10584:SF200 - SUGAR KINASE // SUBFAMILY NOT NAMED Genomic Order:  32
Name:  ? Tp57577_TGAC_v2_gene17389 Secondary Identifier:  ? PAC:35966689
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-3801 Trifolium pratense pathologic  
Tpratense PWY-4101 Trifolium pratense pathologic  
Tpratense PWY-621 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17389 0.5kb upstream 0.5kb upstream 3985 true Tp57577_TGAC_v2_scaf_229: 235141-239125 Trifolium pratense
Tp57577_TGAC_v2_gene17389 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_229: 238626-239125 Trifolium pratense
Tp57577_TGAC_v2_gene17389 0.5kb downstream 0.5kb downstream 3985 true Tp57577_TGAC_v2_scaf_229: 234641-238625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_229: 234641-235140 Trifolium pratense
Tp57577_TGAC_v2_gene17389 1.0kb upstream 1.0kb upstream 4485 true Tp57577_TGAC_v2_scaf_229: 235141-239625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_229: 238626-239625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 1.0kb downstream 1.0kb downstream 4485 true Tp57577_TGAC_v2_scaf_229: 234141-238625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_229: 234141-235140 Trifolium pratense
Tp57577_TGAC_v2_gene17389 2.0kb upstream 2.0kb upstream 5485 true Tp57577_TGAC_v2_scaf_229: 235141-240625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_229: 238626-240625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 2.0kb downstream 2.0kb downstream 5485 true Tp57577_TGAC_v2_scaf_229: 233141-238625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_229: 233141-235140 Trifolium pratense
Tp57577_TGAC_v2_gene17389 5.0kb upstream 5.0kb upstream 8485 true Tp57577_TGAC_v2_scaf_229: 235141-243625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_229: 238626-243625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 5.0kb downstream 5.0kb downstream 8485 true Tp57577_TGAC_v2_scaf_229: 230141-238625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_229: 230141-235140 Trifolium pratense
Tp57577_TGAC_v2_gene17389 10.0kb upstream 10.0kb upstream 13485 true Tp57577_TGAC_v2_scaf_229: 235141-248625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_229: 238626-248625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 10.0kb downstream 10.0kb downstream 13485 true Tp57577_TGAC_v2_scaf_229: 225141-238625 Trifolium pratense
Tp57577_TGAC_v2_gene17389 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_229: 225141-235140 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310303 5265 Fabidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain