Gene : Tp57577_TGAC_v2_gene28016 T. pratense v2
Defline:  (1 of 2) K00587 - protein-S-isoprenylcysteine O-methyltransferase (ICMT, STE14) Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene28016 Secondary Identifier:  ? PAC:35985100
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28016 0.5kb upstream 0.5kb upstream 1807 true Tp57577_TGAC_v2_scaf_865: 56149-57955 Trifolium pratense
Tp57577_TGAC_v2_gene28016 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_865: 57456-57955 Trifolium pratense
Tp57577_TGAC_v2_gene28016 0.5kb downstream 0.5kb downstream 1807 true Tp57577_TGAC_v2_scaf_865: 55649-57455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_865: 55649-56148 Trifolium pratense
Tp57577_TGAC_v2_gene28016 1.0kb upstream 1.0kb upstream 2307 true Tp57577_TGAC_v2_scaf_865: 56149-58455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_865: 57456-58455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 1.0kb downstream 1.0kb downstream 2307 true Tp57577_TGAC_v2_scaf_865: 55149-57455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_865: 55149-56148 Trifolium pratense
Tp57577_TGAC_v2_gene28016 2.0kb upstream 2.0kb upstream 3307 true Tp57577_TGAC_v2_scaf_865: 56149-59455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_865: 57456-59455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 2.0kb downstream 2.0kb downstream 3307 true Tp57577_TGAC_v2_scaf_865: 54149-57455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_865: 54149-56148 Trifolium pratense
Tp57577_TGAC_v2_gene28016 5.0kb upstream 5.0kb upstream 6307 true Tp57577_TGAC_v2_scaf_865: 56149-62455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_865: 57456-62455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 5.0kb downstream 5.0kb downstream 6307 true Tp57577_TGAC_v2_scaf_865: 51149-57455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_865: 51149-56148 Trifolium pratense
Tp57577_TGAC_v2_gene28016 10.0kb upstream 10.0kb upstream 11307 true Tp57577_TGAC_v2_scaf_865: 56149-67455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_865: 57456-67455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 10.0kb downstream 10.0kb downstream 11307 true Tp57577_TGAC_v2_scaf_865: 46149-57455 Trifolium pratense
Tp57577_TGAC_v2_gene28016 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_865: 46149-56148 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299144 5265 Fabidae View MSA
124069484 5270 Rosid View MSA
123738938 5271 Pentapetalae View MSA
122789708 5272 Eudicot View MSA
122050758 5273 Angiosperm View MSA
121345663 5274 Embryophyte View MSA
123424418 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain