Gene : Tp57577_TGAC_v2_gene28015 T. pratense v2
Defline:  (1 of 3) K01580 - glutamate decarboxylase (E4.1.1.15, gadB, gadA, GAD) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene28015 Secondary Identifier:  ? PAC:35985097
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLUDEG-I-PWY Trifolium pratense pathologic  
Tpratense PWY0-1305 Trifolium pratense pathologic  
Tpratense PWY-4321 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28015 0.5kb upstream 0.5kb upstream 4348 true Tp57577_TGAC_v2_scaf_865: 16960-21307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_865: 16960-17459 Trifolium pratense
Tp57577_TGAC_v2_gene28015 0.5kb downstream 0.5kb downstream 4348 true Tp57577_TGAC_v2_scaf_865: 17460-21807 Trifolium pratense
Tp57577_TGAC_v2_gene28015 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_865: 21308-21807 Trifolium pratense
Tp57577_TGAC_v2_gene28015 1.0kb upstream 1.0kb upstream 4848 true Tp57577_TGAC_v2_scaf_865: 16460-21307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_865: 16460-17459 Trifolium pratense
Tp57577_TGAC_v2_gene28015 1.0kb downstream 1.0kb downstream 4848 true Tp57577_TGAC_v2_scaf_865: 17460-22307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_865: 21308-22307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 2.0kb upstream 2.0kb upstream 5848 true Tp57577_TGAC_v2_scaf_865: 15460-21307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_865: 15460-17459 Trifolium pratense
Tp57577_TGAC_v2_gene28015 2.0kb downstream 2.0kb downstream 5848 true Tp57577_TGAC_v2_scaf_865: 17460-23307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_865: 21308-23307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 5.0kb upstream 5.0kb upstream 8848 true Tp57577_TGAC_v2_scaf_865: 12460-21307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_865: 12460-17459 Trifolium pratense
Tp57577_TGAC_v2_gene28015 5.0kb downstream 5.0kb downstream 8848 true Tp57577_TGAC_v2_scaf_865: 17460-26307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_865: 21308-26307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 10.0kb upstream 10.0kb upstream 13848 true Tp57577_TGAC_v2_scaf_865: 7460-21307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_865: 7460-17459 Trifolium pratense
Tp57577_TGAC_v2_gene28015 10.0kb downstream 10.0kb downstream 13848 true Tp57577_TGAC_v2_scaf_865: 17460-31307 Trifolium pratense
Tp57577_TGAC_v2_gene28015 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_865: 21308-31307 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304634 5265 Fabidae View MSA
124069705 5270 Rosid View MSA
123740239 5271 Pentapetalae View MSA
122794594 5272 Eudicot View MSA
122050334 5273 Angiosperm View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain