Gene : Tp57577_TGAC_v2_gene17428 T. pratense v2
Defline:  (1 of 1) PTHR35501:SF2 - PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN (LTP) FAMILY PROTEIN-RELATED Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene17428 Secondary Identifier:  ? PAC:35966684
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17428 0.5kb upstream 0.5kb upstream 1083 true Tp57577_TGAC_v2_scaf_229: 75183-76265 Trifolium pratense
Tp57577_TGAC_v2_gene17428 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_229: 75766-76265 Trifolium pratense
Tp57577_TGAC_v2_gene17428 0.5kb downstream 0.5kb downstream 1083 true Tp57577_TGAC_v2_scaf_229: 74683-75765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_229: 74683-75182 Trifolium pratense
Tp57577_TGAC_v2_gene17428 1.0kb upstream 1.0kb upstream 1583 true Tp57577_TGAC_v2_scaf_229: 75183-76765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_229: 75766-76765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 1.0kb downstream 1.0kb downstream 1583 true Tp57577_TGAC_v2_scaf_229: 74183-75765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_229: 74183-75182 Trifolium pratense
Tp57577_TGAC_v2_gene17428 2.0kb upstream 2.0kb upstream 2583 true Tp57577_TGAC_v2_scaf_229: 75183-77765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_229: 75766-77765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 2.0kb downstream 2.0kb downstream 2583 true Tp57577_TGAC_v2_scaf_229: 73183-75765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_229: 73183-75182 Trifolium pratense
Tp57577_TGAC_v2_gene17428 5.0kb upstream 5.0kb upstream 5583 true Tp57577_TGAC_v2_scaf_229: 75183-80765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_229: 75766-80765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 5.0kb downstream 5.0kb downstream 5583 true Tp57577_TGAC_v2_scaf_229: 70183-75765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_229: 70183-75182 Trifolium pratense
Tp57577_TGAC_v2_gene17428 10.0kb upstream 10.0kb upstream 10583 true Tp57577_TGAC_v2_scaf_229: 75183-85765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_229: 75766-85765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 10.0kb downstream 10.0kb downstream 10583 true Tp57577_TGAC_v2_scaf_229: 65183-75765 Trifolium pratense
Tp57577_TGAC_v2_gene17428 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_229: 65183-75182 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309728 5265 Fabidae View MSA
124050324 5270 Rosid View MSA
123739787 5271 Pentapetalae View MSA
122794916 5272 Eudicot View MSA
122045220 5273 Angiosperm View MSA
121310419 5274 Embryophyte View MSA
123347907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain