Gene : Tp57577_TGAC_v2_gene17419 T. pratense v2
Defline:  (1 of 2) PTHR14237:SF28 - CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING PROTEIN Genomic Order:  25
Name:  ? Tp57577_TGAC_v2_gene17419 Secondary Identifier:  ? PAC:35966700
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5963 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17419 0.5kb upstream 0.5kb upstream 2851 true Tp57577_TGAC_v2_scaf_229: 188266-191116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_229: 188266-188765 Trifolium pratense
Tp57577_TGAC_v2_gene17419 0.5kb downstream 0.5kb downstream 2851 true Tp57577_TGAC_v2_scaf_229: 188766-191616 Trifolium pratense
Tp57577_TGAC_v2_gene17419 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_229: 191117-191616 Trifolium pratense
Tp57577_TGAC_v2_gene17419 1.0kb upstream 1.0kb upstream 3351 true Tp57577_TGAC_v2_scaf_229: 187766-191116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_229: 187766-188765 Trifolium pratense
Tp57577_TGAC_v2_gene17419 1.0kb downstream 1.0kb downstream 3351 true Tp57577_TGAC_v2_scaf_229: 188766-192116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_229: 191117-192116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 2.0kb upstream 2.0kb upstream 4351 true Tp57577_TGAC_v2_scaf_229: 186766-191116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_229: 186766-188765 Trifolium pratense
Tp57577_TGAC_v2_gene17419 2.0kb downstream 2.0kb downstream 4351 true Tp57577_TGAC_v2_scaf_229: 188766-193116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_229: 191117-193116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 5.0kb upstream 5.0kb upstream 7351 true Tp57577_TGAC_v2_scaf_229: 183766-191116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_229: 183766-188765 Trifolium pratense
Tp57577_TGAC_v2_gene17419 5.0kb downstream 5.0kb downstream 7351 true Tp57577_TGAC_v2_scaf_229: 188766-196116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_229: 191117-196116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 10.0kb upstream 10.0kb upstream 12351 true Tp57577_TGAC_v2_scaf_229: 178766-191116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_229: 178766-188765 Trifolium pratense
Tp57577_TGAC_v2_gene17419 10.0kb downstream 10.0kb downstream 12351 true Tp57577_TGAC_v2_scaf_229: 188766-201116 Trifolium pratense
Tp57577_TGAC_v2_gene17419 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_229: 191117-201116 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314685 5265 Fabidae View MSA
124069827 5270 Rosid View MSA
123745676 5271 Pentapetalae View MSA
122790060 5272 Eudicot View MSA
122044983 5273 Angiosperm View MSA
121350233 5274 Embryophyte View MSA
123381636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain