Gene : Tp57577_TGAC_v2_gene12932 T. pratense v2

Defline:  (1 of 1) K02960 - small subunit ribosomal protein S16e (RP-S16e, RPS16) Genomic Order:  234
Name:  ? Tp57577_TGAC_v2_gene12932 Secondary Identifier:  ? PAC:35989468

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12932 0.5kb upstream 0.5kb upstream 1148 true Tp57577_TGAC_v2_LG3: 1878271-1879418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 1878271-1878770 Trifolium pratense
Tp57577_TGAC_v2_gene12932 0.5kb downstream 0.5kb downstream 1148 true Tp57577_TGAC_v2_LG3: 1878771-1879918 Trifolium pratense
Tp57577_TGAC_v2_gene12932 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 1879419-1879918 Trifolium pratense
Tp57577_TGAC_v2_gene12932 1.0kb upstream 1.0kb upstream 1648 true Tp57577_TGAC_v2_LG3: 1877771-1879418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 1877771-1878770 Trifolium pratense
Tp57577_TGAC_v2_gene12932 1.0kb downstream 1.0kb downstream 1648 true Tp57577_TGAC_v2_LG3: 1878771-1880418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 1879419-1880418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 2.0kb upstream 2.0kb upstream 2648 true Tp57577_TGAC_v2_LG3: 1876771-1879418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 1876771-1878770 Trifolium pratense
Tp57577_TGAC_v2_gene12932 2.0kb downstream 2.0kb downstream 2648 true Tp57577_TGAC_v2_LG3: 1878771-1881418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 1879419-1881418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 5.0kb upstream 5.0kb upstream 5648 true Tp57577_TGAC_v2_LG3: 1873771-1879418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 1873771-1878770 Trifolium pratense
Tp57577_TGAC_v2_gene12932 5.0kb downstream 5.0kb downstream 5648 true Tp57577_TGAC_v2_LG3: 1878771-1884418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 1879419-1884418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 10.0kb upstream 10.0kb upstream 10648 true Tp57577_TGAC_v2_LG3: 1868771-1879418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 1868771-1878770 Trifolium pratense
Tp57577_TGAC_v2_gene12932 10.0kb downstream 10.0kb downstream 10648 true Tp57577_TGAC_v2_LG3: 1878771-1889418 Trifolium pratense
Tp57577_TGAC_v2_gene12932 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 1879419-1889418 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303665 5265 Fabidae View MSA
124069246 5270 Rosid View MSA
123741428 5271 Pentapetalae View MSA
122794496 5272 Eudicot View MSA
122042530 5273 Angiosperm View MSA
121347858 5274 Embryophyte View MSA
123423904 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain