Gene : Tp57577_TGAC_v2_gene12923 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  279
Name:  ? Tp57577_TGAC_v2_gene12923 Secondary Identifier:  ? PAC:35988259
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12923 0.5kb upstream 0.5kb upstream 2932 true Tp57577_TGAC_v2_LG3: 2189252-2192183 Trifolium pratense
Tp57577_TGAC_v2_gene12923 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 2191684-2192183 Trifolium pratense
Tp57577_TGAC_v2_gene12923 0.5kb downstream 0.5kb downstream 2932 true Tp57577_TGAC_v2_LG3: 2188752-2191683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 2188752-2189251 Trifolium pratense
Tp57577_TGAC_v2_gene12923 1.0kb upstream 1.0kb upstream 3432 true Tp57577_TGAC_v2_LG3: 2189252-2192683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 2191684-2192683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 1.0kb downstream 1.0kb downstream 3432 true Tp57577_TGAC_v2_LG3: 2188252-2191683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 2188252-2189251 Trifolium pratense
Tp57577_TGAC_v2_gene12923 2.0kb upstream 2.0kb upstream 4432 true Tp57577_TGAC_v2_LG3: 2189252-2193683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 2191684-2193683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 2.0kb downstream 2.0kb downstream 4432 true Tp57577_TGAC_v2_LG3: 2187252-2191683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 2187252-2189251 Trifolium pratense
Tp57577_TGAC_v2_gene12923 5.0kb upstream 5.0kb upstream 7432 true Tp57577_TGAC_v2_LG3: 2189252-2196683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 2191684-2196683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 5.0kb downstream 5.0kb downstream 7432 true Tp57577_TGAC_v2_LG3: 2184252-2191683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 2184252-2189251 Trifolium pratense
Tp57577_TGAC_v2_gene12923 10.0kb upstream 10.0kb upstream 12432 true Tp57577_TGAC_v2_LG3: 2189252-2201683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 2191684-2201683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 10.0kb downstream 10.0kb downstream 12432 true Tp57577_TGAC_v2_LG3: 2179252-2191683 Trifolium pratense
Tp57577_TGAC_v2_gene12923 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 2179252-2189251 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303393 5265 Fabidae View MSA
124050196 5270 Rosid View MSA
123737959 5271 Pentapetalae View MSA
122788156 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain