Gene : Tp57577_TGAC_v2_gene21237 T. pratense v2
Defline:  (1 of 2) PTHR14732:SF0 - RNA POLYMERASE II SUBUNIT B1 CTD PHOSPHATASE RPAP2-RELATED Genomic Order:  3137
Name:  ? Tp57577_TGAC_v2_gene21237 Secondary Identifier:  ? PAC:35978422
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21237 0.5kb upstream 0.5kb upstream 8382 true Tp57577_TGAC_v2_LG1: 26992490-27000871 Trifolium pratense
Tp57577_TGAC_v2_gene21237 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 27000372-27000871 Trifolium pratense
Tp57577_TGAC_v2_gene21237 0.5kb downstream 0.5kb downstream 8382 true Tp57577_TGAC_v2_LG1: 26991990-27000371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 26991990-26992489 Trifolium pratense
Tp57577_TGAC_v2_gene21237 1.0kb upstream 1.0kb upstream 8882 true Tp57577_TGAC_v2_LG1: 26992490-27001371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 27000372-27001371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 1.0kb downstream 1.0kb downstream 8882 true Tp57577_TGAC_v2_LG1: 26991490-27000371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 26991490-26992489 Trifolium pratense
Tp57577_TGAC_v2_gene21237 2.0kb upstream 2.0kb upstream 9882 true Tp57577_TGAC_v2_LG1: 26992490-27002371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 27000372-27002371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 2.0kb downstream 2.0kb downstream 9882 true Tp57577_TGAC_v2_LG1: 26990490-27000371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 26990490-26992489 Trifolium pratense
Tp57577_TGAC_v2_gene21237 5.0kb upstream 5.0kb upstream 12882 true Tp57577_TGAC_v2_LG1: 26992490-27005371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 27000372-27005371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 5.0kb downstream 5.0kb downstream 12882 true Tp57577_TGAC_v2_LG1: 26987490-27000371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 26987490-26992489 Trifolium pratense
Tp57577_TGAC_v2_gene21237 10.0kb upstream 10.0kb upstream 17882 true Tp57577_TGAC_v2_LG1: 26992490-27010371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 27000372-27010371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 10.0kb downstream 10.0kb downstream 17882 true Tp57577_TGAC_v2_LG1: 26982490-27000371 Trifolium pratense
Tp57577_TGAC_v2_gene21237 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 26982490-26992489 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304896 5265 Fabidae View MSA
124069329 5270 Rosid View MSA
123741473 5271 Pentapetalae View MSA
122794606 5272 Eudicot View MSA
122046248 5273 Angiosperm View MSA
121347996 5274 Embryophyte View MSA
123426503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain