Gene : Tp57577_TGAC_v2_gene12963 T. pratense v2
Defline:  (1 of 1) K03428 - magnesium-protoporphyrin O-methyltransferase (E2.1.1.11, chlM, bchM) Genomic Order:  293
Name:  ? Tp57577_TGAC_v2_gene12963 Secondary Identifier:  ? PAC:35990532
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CHLOROPHYLL-SYN Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12963 0.5kb upstream 0.5kb upstream 2876 true Tp57577_TGAC_v2_LG3: 2273228-2276103 Trifolium pratense
Tp57577_TGAC_v2_gene12963 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 2275604-2276103 Trifolium pratense
Tp57577_TGAC_v2_gene12963 0.5kb downstream 0.5kb downstream 2876 true Tp57577_TGAC_v2_LG3: 2272728-2275603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 2272728-2273227 Trifolium pratense
Tp57577_TGAC_v2_gene12963 1.0kb upstream 1.0kb upstream 3376 true Tp57577_TGAC_v2_LG3: 2273228-2276603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 2275604-2276603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 1.0kb downstream 1.0kb downstream 3376 true Tp57577_TGAC_v2_LG3: 2272228-2275603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 2272228-2273227 Trifolium pratense
Tp57577_TGAC_v2_gene12963 2.0kb upstream 2.0kb upstream 4376 true Tp57577_TGAC_v2_LG3: 2273228-2277603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 2275604-2277603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 2.0kb downstream 2.0kb downstream 4376 true Tp57577_TGAC_v2_LG3: 2271228-2275603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 2271228-2273227 Trifolium pratense
Tp57577_TGAC_v2_gene12963 5.0kb upstream 5.0kb upstream 7376 true Tp57577_TGAC_v2_LG3: 2273228-2280603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 2275604-2280603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 5.0kb downstream 5.0kb downstream 7376 true Tp57577_TGAC_v2_LG3: 2268228-2275603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 2268228-2273227 Trifolium pratense
Tp57577_TGAC_v2_gene12963 10.0kb upstream 10.0kb upstream 12376 true Tp57577_TGAC_v2_LG3: 2273228-2285603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 2275604-2285603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 10.0kb downstream 10.0kb downstream 12376 true Tp57577_TGAC_v2_LG3: 2263228-2275603 Trifolium pratense
Tp57577_TGAC_v2_gene12963 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 2263228-2273227 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303274 5265 Fabidae View MSA
124063619 5270 Rosid View MSA
123739209 5271 Pentapetalae View MSA
122792870 5272 Eudicot View MSA
122043100 5273 Angiosperm View MSA
121345477 5274 Embryophyte View MSA
123424951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain