Gene : Tp57577_TGAC_v2_gene12862 T. pratense v2
Defline:  (1 of 2) K01919 - glutamate--cysteine ligase (gshA) Genomic Order:  371
Name:  ? Tp57577_TGAC_v2_gene12862 Secondary Identifier:  ? PAC:35990384
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLUTATHIONESYN-PWY Trifolium pratense pathologic  
Tpratense PWY-6840 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12862 0.5kb upstream 0.5kb upstream 7463 true Tp57577_TGAC_v2_LG3: 2839116-2846578 Trifolium pratense
Tp57577_TGAC_v2_gene12862 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 2846079-2846578 Trifolium pratense
Tp57577_TGAC_v2_gene12862 0.5kb downstream 0.5kb downstream 7463 true Tp57577_TGAC_v2_LG3: 2838616-2846078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 2838616-2839115 Trifolium pratense
Tp57577_TGAC_v2_gene12862 1.0kb upstream 1.0kb upstream 7963 true Tp57577_TGAC_v2_LG3: 2839116-2847078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 2846079-2847078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 1.0kb downstream 1.0kb downstream 7963 true Tp57577_TGAC_v2_LG3: 2838116-2846078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 2838116-2839115 Trifolium pratense
Tp57577_TGAC_v2_gene12862 2.0kb upstream 2.0kb upstream 8963 true Tp57577_TGAC_v2_LG3: 2839116-2848078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 2846079-2848078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 2.0kb downstream 2.0kb downstream 8963 true Tp57577_TGAC_v2_LG3: 2837116-2846078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 2837116-2839115 Trifolium pratense
Tp57577_TGAC_v2_gene12862 5.0kb upstream 5.0kb upstream 11963 true Tp57577_TGAC_v2_LG3: 2839116-2851078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 2846079-2851078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 5.0kb downstream 5.0kb downstream 11963 true Tp57577_TGAC_v2_LG3: 2834116-2846078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 2834116-2839115 Trifolium pratense
Tp57577_TGAC_v2_gene12862 10.0kb upstream 10.0kb upstream 16963 true Tp57577_TGAC_v2_LG3: 2839116-2856078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 2846079-2856078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 10.0kb downstream 10.0kb downstream 16963 true Tp57577_TGAC_v2_LG3: 2829116-2846078 Trifolium pratense
Tp57577_TGAC_v2_gene12862 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 2829116-2839115 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301926 5265 Fabidae View MSA
124066026 5270 Rosid View MSA
123737554 5271 Pentapetalae View MSA
122790790 5272 Eudicot View MSA
122044028 5273 Angiosperm View MSA
121346589 5274 Embryophyte View MSA
123424300 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain