Gene : Tp57577_TGAC_v2_gene12893 T. pratense v2
Defline:  (1 of 1) PTHR31734:SF28 - AUXIN-RESPONSIVE PROTEIN IAA16 Genomic Order:  252
Name:  ? Tp57577_TGAC_v2_gene12893 Secondary Identifier:  ? PAC:35988812
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12893 0.5kb upstream 0.5kb upstream 4729 true Tp57577_TGAC_v2_LG3: 1964132-1968860 Trifolium pratense
Tp57577_TGAC_v2_gene12893 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 1968361-1968860 Trifolium pratense
Tp57577_TGAC_v2_gene12893 0.5kb downstream 0.5kb downstream 4729 true Tp57577_TGAC_v2_LG3: 1963632-1968360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 1963632-1964131 Trifolium pratense
Tp57577_TGAC_v2_gene12893 1.0kb upstream 1.0kb upstream 5229 true Tp57577_TGAC_v2_LG3: 1964132-1969360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 1968361-1969360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 1.0kb downstream 1.0kb downstream 5229 true Tp57577_TGAC_v2_LG3: 1963132-1968360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 1963132-1964131 Trifolium pratense
Tp57577_TGAC_v2_gene12893 2.0kb upstream 2.0kb upstream 6229 true Tp57577_TGAC_v2_LG3: 1964132-1970360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 1968361-1970360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 2.0kb downstream 2.0kb downstream 6229 true Tp57577_TGAC_v2_LG3: 1962132-1968360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 1962132-1964131 Trifolium pratense
Tp57577_TGAC_v2_gene12893 5.0kb upstream 5.0kb upstream 9229 true Tp57577_TGAC_v2_LG3: 1964132-1973360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 1968361-1973360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 5.0kb downstream 5.0kb downstream 9229 true Tp57577_TGAC_v2_LG3: 1959132-1968360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 1959132-1964131 Trifolium pratense
Tp57577_TGAC_v2_gene12893 10.0kb upstream 10.0kb upstream 14229 true Tp57577_TGAC_v2_LG3: 1964132-1978360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 1968361-1978360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 10.0kb downstream 10.0kb downstream 14229 true Tp57577_TGAC_v2_LG3: 1954132-1968360 Trifolium pratense
Tp57577_TGAC_v2_gene12893 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 1954132-1964131 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308156 5265 Fabidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain