Gene : Tp57577_TGAC_v2_gene21146 T. pratense v2
Defline:  (1 of 2) PF05479 - Photosystem I reaction centre subunit N (PSAN or PSI-N) (PsaN) Genomic Order:  390
Name:  ? Tp57577_TGAC_v2_gene21146 Secondary Identifier:  ? PAC:35980768
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21146 0.5kb upstream 0.5kb upstream 1430 true Tp57577_TGAC_v2_LG1: 2929223-2930652 Trifolium pratense
Tp57577_TGAC_v2_gene21146 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 2930153-2930652 Trifolium pratense
Tp57577_TGAC_v2_gene21146 0.5kb downstream 0.5kb downstream 1430 true Tp57577_TGAC_v2_LG1: 2928723-2930152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 2928723-2929222 Trifolium pratense
Tp57577_TGAC_v2_gene21146 1.0kb upstream 1.0kb upstream 1930 true Tp57577_TGAC_v2_LG1: 2929223-2931152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 2930153-2931152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 1.0kb downstream 1.0kb downstream 1930 true Tp57577_TGAC_v2_LG1: 2928223-2930152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 2928223-2929222 Trifolium pratense
Tp57577_TGAC_v2_gene21146 2.0kb upstream 2.0kb upstream 2930 true Tp57577_TGAC_v2_LG1: 2929223-2932152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 2930153-2932152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 2.0kb downstream 2.0kb downstream 2930 true Tp57577_TGAC_v2_LG1: 2927223-2930152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 2927223-2929222 Trifolium pratense
Tp57577_TGAC_v2_gene21146 5.0kb upstream 5.0kb upstream 5930 true Tp57577_TGAC_v2_LG1: 2929223-2935152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 2930153-2935152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 5.0kb downstream 5.0kb downstream 5930 true Tp57577_TGAC_v2_LG1: 2924223-2930152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 2924223-2929222 Trifolium pratense
Tp57577_TGAC_v2_gene21146 10.0kb upstream 10.0kb upstream 10930 true Tp57577_TGAC_v2_LG1: 2929223-2940152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 2930153-2940152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 10.0kb downstream 10.0kb downstream 10930 true Tp57577_TGAC_v2_LG1: 2919223-2930152 Trifolium pratense
Tp57577_TGAC_v2_gene21146 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 2919223-2929222 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304642 5265 Fabidae View MSA
124067734 5270 Rosid View MSA
123736810 5271 Pentapetalae View MSA
122791162 5272 Eudicot View MSA
122050730 5273 Angiosperm View MSA
121348092 5274 Embryophyte View MSA
123425572 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain