Gene : Tp57577_TGAC_v2_gene14485 T. pratense v2
Defline:  (1 of 3) PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Genomic Order:  2729
Name:  ? Tp57577_TGAC_v2_gene14485 Secondary Identifier:  ? PAC:35987268
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14485 0.5kb upstream 0.5kb upstream 6050 true Tp57577_TGAC_v2_LG3: 23096359-23102408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 23096359-23096858 Trifolium pratense
Tp57577_TGAC_v2_gene14485 0.5kb downstream 0.5kb downstream 6050 true Tp57577_TGAC_v2_LG3: 23096859-23102908 Trifolium pratense
Tp57577_TGAC_v2_gene14485 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 23102409-23102908 Trifolium pratense
Tp57577_TGAC_v2_gene14485 1.0kb upstream 1.0kb upstream 6550 true Tp57577_TGAC_v2_LG3: 23095859-23102408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 23095859-23096858 Trifolium pratense
Tp57577_TGAC_v2_gene14485 1.0kb downstream 1.0kb downstream 6550 true Tp57577_TGAC_v2_LG3: 23096859-23103408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 23102409-23103408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 2.0kb upstream 2.0kb upstream 7550 true Tp57577_TGAC_v2_LG3: 23094859-23102408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 23094859-23096858 Trifolium pratense
Tp57577_TGAC_v2_gene14485 2.0kb downstream 2.0kb downstream 7550 true Tp57577_TGAC_v2_LG3: 23096859-23104408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 23102409-23104408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 5.0kb upstream 5.0kb upstream 10550 true Tp57577_TGAC_v2_LG3: 23091859-23102408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 23091859-23096858 Trifolium pratense
Tp57577_TGAC_v2_gene14485 5.0kb downstream 5.0kb downstream 10550 true Tp57577_TGAC_v2_LG3: 23096859-23107408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 23102409-23107408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 10.0kb upstream 10.0kb upstream 15550 true Tp57577_TGAC_v2_LG3: 23086859-23102408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 23086859-23096858 Trifolium pratense
Tp57577_TGAC_v2_gene14485 10.0kb downstream 10.0kb downstream 15550 true Tp57577_TGAC_v2_LG3: 23096859-23112408 Trifolium pratense
Tp57577_TGAC_v2_gene14485 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 23102409-23112408 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027848 5273 Angiosperm View MSA
124063850 5270 Rosid View MSA
122304792 5265 Fabidae View MSA
123736546 5271 Pentapetalae View MSA
122787346 5272 Eudicot View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain