Gene : Tp57577_TGAC_v2_gene12233 T. pratense v2
Defline:  (1 of 1) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase Genomic Order:  3487
Name:  ? Tp57577_TGAC_v2_gene12233 Secondary Identifier:  ? PAC:35990820
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5129 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12233 0.5kb upstream 0.5kb upstream 6494 true Tp57577_TGAC_v2_LG3: 29811592-29818085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 29811592-29812091 Trifolium pratense
Tp57577_TGAC_v2_gene12233 0.5kb downstream 0.5kb downstream 6494 true Tp57577_TGAC_v2_LG3: 29812092-29818585 Trifolium pratense
Tp57577_TGAC_v2_gene12233 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 29818086-29818585 Trifolium pratense
Tp57577_TGAC_v2_gene12233 1.0kb upstream 1.0kb upstream 6994 true Tp57577_TGAC_v2_LG3: 29811092-29818085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 29811092-29812091 Trifolium pratense
Tp57577_TGAC_v2_gene12233 1.0kb downstream 1.0kb downstream 6994 true Tp57577_TGAC_v2_LG3: 29812092-29819085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 29818086-29819085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 2.0kb upstream 2.0kb upstream 7994 true Tp57577_TGAC_v2_LG3: 29810092-29818085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 29810092-29812091 Trifolium pratense
Tp57577_TGAC_v2_gene12233 2.0kb downstream 2.0kb downstream 7994 true Tp57577_TGAC_v2_LG3: 29812092-29820085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 29818086-29820085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 5.0kb upstream 5.0kb upstream 10994 true Tp57577_TGAC_v2_LG3: 29807092-29818085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 29807092-29812091 Trifolium pratense
Tp57577_TGAC_v2_gene12233 5.0kb downstream 5.0kb downstream 10994 true Tp57577_TGAC_v2_LG3: 29812092-29823085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 29818086-29823085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 10.0kb upstream 10.0kb upstream 15994 true Tp57577_TGAC_v2_LG3: 29802092-29818085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 29802092-29812091 Trifolium pratense
Tp57577_TGAC_v2_gene12233 10.0kb downstream 10.0kb downstream 15994 true Tp57577_TGAC_v2_LG3: 29812092-29828085 Trifolium pratense
Tp57577_TGAC_v2_gene12233 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 29818086-29828085 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308468 5265 Fabidae View MSA
124066629 5270 Rosid View MSA
123746434 5271 Pentapetalae View MSA
122791324 5272 Eudicot View MSA
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain