Gene : Tp57577_TGAC_v2_gene12243 T. pratense v2
Defline:  (1 of 2) PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED Genomic Order:  3404
Name:  ? Tp57577_TGAC_v2_gene12243 Secondary Identifier:  ? PAC:35990307
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12243 0.5kb upstream 0.5kb upstream 3196 true Tp57577_TGAC_v2_LG3: 29117924-29121119 Trifolium pratense
Tp57577_TGAC_v2_gene12243 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 29120620-29121119 Trifolium pratense
Tp57577_TGAC_v2_gene12243 0.5kb downstream 0.5kb downstream 3196 true Tp57577_TGAC_v2_LG3: 29117424-29120619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 29117424-29117923 Trifolium pratense
Tp57577_TGAC_v2_gene12243 1.0kb upstream 1.0kb upstream 3696 true Tp57577_TGAC_v2_LG3: 29117924-29121619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 29120620-29121619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 1.0kb downstream 1.0kb downstream 3696 true Tp57577_TGAC_v2_LG3: 29116924-29120619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 29116924-29117923 Trifolium pratense
Tp57577_TGAC_v2_gene12243 2.0kb upstream 2.0kb upstream 4696 true Tp57577_TGAC_v2_LG3: 29117924-29122619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 29120620-29122619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 2.0kb downstream 2.0kb downstream 4696 true Tp57577_TGAC_v2_LG3: 29115924-29120619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 29115924-29117923 Trifolium pratense
Tp57577_TGAC_v2_gene12243 5.0kb upstream 5.0kb upstream 7696 true Tp57577_TGAC_v2_LG3: 29117924-29125619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 29120620-29125619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 5.0kb downstream 5.0kb downstream 7696 true Tp57577_TGAC_v2_LG3: 29112924-29120619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 29112924-29117923 Trifolium pratense
Tp57577_TGAC_v2_gene12243 10.0kb upstream 10.0kb upstream 12696 true Tp57577_TGAC_v2_LG3: 29117924-29130619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 29120620-29130619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 10.0kb downstream 10.0kb downstream 12696 true Tp57577_TGAC_v2_LG3: 29107924-29120619 Trifolium pratense
Tp57577_TGAC_v2_gene12243 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 29107924-29117923 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314382 5265 Fabidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain