Gene : Tp57577_TGAC_v2_gene12221 T. pratense v2
Defline:  (1 of 2) K01079 - phosphoserine phosphatase (serB, PSPH) Genomic Order:  3399
Name:  ? Tp57577_TGAC_v2_gene12221 Secondary Identifier:  ? PAC:35989550
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense SER-GLYSYN-PWY Trifolium pratense pathologic  
Tpratense SERSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12221 0.5kb upstream 0.5kb upstream 5726 true Tp57577_TGAC_v2_LG3: 29084136-29089861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 29084136-29084635 Trifolium pratense
Tp57577_TGAC_v2_gene12221 0.5kb downstream 0.5kb downstream 5726 true Tp57577_TGAC_v2_LG3: 29084636-29090361 Trifolium pratense
Tp57577_TGAC_v2_gene12221 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 29089862-29090361 Trifolium pratense
Tp57577_TGAC_v2_gene12221 1.0kb upstream 1.0kb upstream 6226 true Tp57577_TGAC_v2_LG3: 29083636-29089861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 29083636-29084635 Trifolium pratense
Tp57577_TGAC_v2_gene12221 1.0kb downstream 1.0kb downstream 6226 true Tp57577_TGAC_v2_LG3: 29084636-29090861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 29089862-29090861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 2.0kb upstream 2.0kb upstream 7226 true Tp57577_TGAC_v2_LG3: 29082636-29089861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 29082636-29084635 Trifolium pratense
Tp57577_TGAC_v2_gene12221 2.0kb downstream 2.0kb downstream 7226 true Tp57577_TGAC_v2_LG3: 29084636-29091861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 29089862-29091861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 5.0kb upstream 5.0kb upstream 10226 true Tp57577_TGAC_v2_LG3: 29079636-29089861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 29079636-29084635 Trifolium pratense
Tp57577_TGAC_v2_gene12221 5.0kb downstream 5.0kb downstream 10226 true Tp57577_TGAC_v2_LG3: 29084636-29094861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 29089862-29094861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 10.0kb upstream 10.0kb upstream 15226 true Tp57577_TGAC_v2_LG3: 29074636-29089861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 29074636-29084635 Trifolium pratense
Tp57577_TGAC_v2_gene12221 10.0kb downstream 10.0kb downstream 15226 true Tp57577_TGAC_v2_LG3: 29084636-29099861 Trifolium pratense
Tp57577_TGAC_v2_gene12221 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 29089862-29099861 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300897 5265 Fabidae View MSA
124065988 5270 Rosid View MSA
123738315 5271 Pentapetalae View MSA
122789675 5272 Eudicot View MSA
122041828 5273 Angiosperm View MSA
121346713 5274 Embryophyte View MSA
123426809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain