Gene : Tp57577_TGAC_v2_gene12247 T. pratense v2
Defline:  (1 of 2) K17080 - prohibitin 1 (PHB1) Genomic Order:  3486
Name:  ? Tp57577_TGAC_v2_gene12247 Secondary Identifier:  ? PAC:35989656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12247 0.5kb upstream 0.5kb upstream 3727 true Tp57577_TGAC_v2_LG3: 29807885-29811611 Trifolium pratense
Tp57577_TGAC_v2_gene12247 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 29811112-29811611 Trifolium pratense
Tp57577_TGAC_v2_gene12247 0.5kb downstream 0.5kb downstream 3727 true Tp57577_TGAC_v2_LG3: 29807385-29811111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 29807385-29807884 Trifolium pratense
Tp57577_TGAC_v2_gene12247 1.0kb upstream 1.0kb upstream 4227 true Tp57577_TGAC_v2_LG3: 29807885-29812111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 29811112-29812111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 1.0kb downstream 1.0kb downstream 4227 true Tp57577_TGAC_v2_LG3: 29806885-29811111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 29806885-29807884 Trifolium pratense
Tp57577_TGAC_v2_gene12247 2.0kb upstream 2.0kb upstream 5227 true Tp57577_TGAC_v2_LG3: 29807885-29813111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 29811112-29813111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 2.0kb downstream 2.0kb downstream 5227 true Tp57577_TGAC_v2_LG3: 29805885-29811111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 29805885-29807884 Trifolium pratense
Tp57577_TGAC_v2_gene12247 5.0kb upstream 5.0kb upstream 8227 true Tp57577_TGAC_v2_LG3: 29807885-29816111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 29811112-29816111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 5.0kb downstream 5.0kb downstream 8227 true Tp57577_TGAC_v2_LG3: 29802885-29811111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 29802885-29807884 Trifolium pratense
Tp57577_TGAC_v2_gene12247 10.0kb upstream 10.0kb upstream 13227 true Tp57577_TGAC_v2_LG3: 29807885-29821111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 29811112-29821111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 10.0kb downstream 10.0kb downstream 13227 true Tp57577_TGAC_v2_LG3: 29797885-29811111 Trifolium pratense
Tp57577_TGAC_v2_gene12247 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 29797885-29807884 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311051 5265 Fabidae View MSA
124063622 5270 Rosid View MSA
123737783 5271 Pentapetalae View MSA
122796459 5272 Eudicot View MSA
122046711 5273 Angiosperm View MSA
121346125 5274 Embryophyte View MSA
123427118 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain