Gene : Tp57577_TGAC_v2_gene17571 T. pratense v2
Defline:  (1 of 3) K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Genomic Order:  44
Name:  ? Tp57577_TGAC_v2_gene17571 Secondary Identifier:  ? PAC:35985587
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17571 0.5kb upstream 0.5kb upstream 5129 true Tp57577_TGAC_v2_scaf_223: 315596-320724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_223: 315596-316095 Trifolium pratense
Tp57577_TGAC_v2_gene17571 0.5kb downstream 0.5kb downstream 5129 true Tp57577_TGAC_v2_scaf_223: 316096-321224 Trifolium pratense
Tp57577_TGAC_v2_gene17571 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_223: 320725-321224 Trifolium pratense
Tp57577_TGAC_v2_gene17571 1.0kb upstream 1.0kb upstream 5629 true Tp57577_TGAC_v2_scaf_223: 315096-320724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_223: 315096-316095 Trifolium pratense
Tp57577_TGAC_v2_gene17571 1.0kb downstream 1.0kb downstream 5629 true Tp57577_TGAC_v2_scaf_223: 316096-321724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_223: 320725-321724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 2.0kb upstream 2.0kb upstream 6629 true Tp57577_TGAC_v2_scaf_223: 314096-320724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_223: 314096-316095 Trifolium pratense
Tp57577_TGAC_v2_gene17571 2.0kb downstream 2.0kb downstream 6629 true Tp57577_TGAC_v2_scaf_223: 316096-322724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_223: 320725-322724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 5.0kb upstream 5.0kb upstream 9629 true Tp57577_TGAC_v2_scaf_223: 311096-320724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_223: 311096-316095 Trifolium pratense
Tp57577_TGAC_v2_gene17571 5.0kb downstream 5.0kb downstream 9629 true Tp57577_TGAC_v2_scaf_223: 316096-325724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_223: 320725-325724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 10.0kb upstream 10.0kb upstream 14629 true Tp57577_TGAC_v2_scaf_223: 306096-320724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_223: 306096-316095 Trifolium pratense
Tp57577_TGAC_v2_gene17571 10.0kb downstream 10.0kb downstream 14629 true Tp57577_TGAC_v2_scaf_223: 316096-330724 Trifolium pratense
Tp57577_TGAC_v2_gene17571 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_223: 320725-330724 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303259 5265 Fabidae View MSA
124062748 5270 Rosid View MSA
123740454 5271 Pentapetalae View MSA
122790295 5272 Eudicot View MSA
122047675 5273 Angiosperm View MSA
121344985 5274 Embryophyte View MSA
123424538 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain