Gene : Tp57577_TGAC_v2_gene12141 T. pratense v2
Defline:  (1 of 88) PF00083 - Sugar (and other) transporter (Sugar_tr) Genomic Order:  3483
Name:  ? Tp57577_TGAC_v2_gene12141 Secondary Identifier:  ? PAC:35990379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12141 0.5kb upstream 0.5kb upstream 3368 true Tp57577_TGAC_v2_LG3: 29793832-29797199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 29793832-29794331 Trifolium pratense
Tp57577_TGAC_v2_gene12141 0.5kb downstream 0.5kb downstream 3368 true Tp57577_TGAC_v2_LG3: 29794332-29797699 Trifolium pratense
Tp57577_TGAC_v2_gene12141 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 29797200-29797699 Trifolium pratense
Tp57577_TGAC_v2_gene12141 1.0kb upstream 1.0kb upstream 3868 true Tp57577_TGAC_v2_LG3: 29793332-29797199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 29793332-29794331 Trifolium pratense
Tp57577_TGAC_v2_gene12141 1.0kb downstream 1.0kb downstream 3868 true Tp57577_TGAC_v2_LG3: 29794332-29798199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 29797200-29798199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 2.0kb upstream 2.0kb upstream 4868 true Tp57577_TGAC_v2_LG3: 29792332-29797199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 29792332-29794331 Trifolium pratense
Tp57577_TGAC_v2_gene12141 2.0kb downstream 2.0kb downstream 4868 true Tp57577_TGAC_v2_LG3: 29794332-29799199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 29797200-29799199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 5.0kb upstream 5.0kb upstream 7868 true Tp57577_TGAC_v2_LG3: 29789332-29797199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 29789332-29794331 Trifolium pratense
Tp57577_TGAC_v2_gene12141 5.0kb downstream 5.0kb downstream 7868 true Tp57577_TGAC_v2_LG3: 29794332-29802199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 29797200-29802199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 10.0kb upstream 10.0kb upstream 12868 true Tp57577_TGAC_v2_LG3: 29784332-29797199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 29784332-29794331 Trifolium pratense
Tp57577_TGAC_v2_gene12141 10.0kb downstream 10.0kb downstream 12868 true Tp57577_TGAC_v2_LG3: 29794332-29807199 Trifolium pratense
Tp57577_TGAC_v2_gene12141 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 29797200-29807199 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314183 5265 Fabidae View MSA
124065824 5270 Rosid View MSA
123742315 5271 Pentapetalae View MSA
122787331 5272 Eudicot View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain