Gene : Tp57577_TGAC_v2_gene12193 T. pratense v2
Defline:  (1 of 2) PTHR10353//PTHR10353:SF44 - GLYCOSYL HYDROLASE // SUBFAMILY NOT NAMED Genomic Order:  3418
Name:  ? Tp57577_TGAC_v2_gene12193 Secondary Identifier:  ? PAC:35987882
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7093 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12193 0.5kb upstream 0.5kb upstream 8432 true Tp57577_TGAC_v2_LG3: 29262526-29270957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 29262526-29263025 Trifolium pratense
Tp57577_TGAC_v2_gene12193 0.5kb downstream 0.5kb downstream 8432 true Tp57577_TGAC_v2_LG3: 29263026-29271457 Trifolium pratense
Tp57577_TGAC_v2_gene12193 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 29270958-29271457 Trifolium pratense
Tp57577_TGAC_v2_gene12193 1.0kb upstream 1.0kb upstream 8932 true Tp57577_TGAC_v2_LG3: 29262026-29270957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 29262026-29263025 Trifolium pratense
Tp57577_TGAC_v2_gene12193 1.0kb downstream 1.0kb downstream 8932 true Tp57577_TGAC_v2_LG3: 29263026-29271957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 29270958-29271957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 2.0kb upstream 2.0kb upstream 9932 true Tp57577_TGAC_v2_LG3: 29261026-29270957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 29261026-29263025 Trifolium pratense
Tp57577_TGAC_v2_gene12193 2.0kb downstream 2.0kb downstream 9932 true Tp57577_TGAC_v2_LG3: 29263026-29272957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 29270958-29272957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 5.0kb upstream 5.0kb upstream 12932 true Tp57577_TGAC_v2_LG3: 29258026-29270957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 29258026-29263025 Trifolium pratense
Tp57577_TGAC_v2_gene12193 5.0kb downstream 5.0kb downstream 12932 true Tp57577_TGAC_v2_LG3: 29263026-29275957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 29270958-29275957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 10.0kb upstream 10.0kb upstream 17932 true Tp57577_TGAC_v2_LG3: 29253026-29270957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 29253026-29263025 Trifolium pratense
Tp57577_TGAC_v2_gene12193 10.0kb downstream 10.0kb downstream 17932 true Tp57577_TGAC_v2_LG3: 29263026-29280957 Trifolium pratense
Tp57577_TGAC_v2_gene12193 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 29270958-29280957 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314908 5265 Fabidae View MSA
124071856 5270 Rosid View MSA
123753517 5271 Pentapetalae View MSA
122797747 5272 Eudicot View MSA
122051599 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain