Gene : Tp57577_TGAC_v2_gene2168 T. pratense v2
Defline:  (1 of 1) K11088 - small nuclear ribonucleoprotein D3 (SNRPD3, SMD3) Genomic Order:  454
Name:  ? Tp57577_TGAC_v2_gene2168 Secondary Identifier:  ? PAC:35987215
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2168 0.5kb upstream 0.5kb upstream 3614 true Tp57577_TGAC_v2_LG3: 3523485-3527098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 3523485-3523984 Trifolium pratense
Tp57577_TGAC_v2_gene2168 0.5kb downstream 0.5kb downstream 3614 true Tp57577_TGAC_v2_LG3: 3523985-3527598 Trifolium pratense
Tp57577_TGAC_v2_gene2168 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 3527099-3527598 Trifolium pratense
Tp57577_TGAC_v2_gene2168 1.0kb upstream 1.0kb upstream 4114 true Tp57577_TGAC_v2_LG3: 3522985-3527098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 3522985-3523984 Trifolium pratense
Tp57577_TGAC_v2_gene2168 1.0kb downstream 1.0kb downstream 4114 true Tp57577_TGAC_v2_LG3: 3523985-3528098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 3527099-3528098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 2.0kb upstream 2.0kb upstream 5114 true Tp57577_TGAC_v2_LG3: 3521985-3527098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 3521985-3523984 Trifolium pratense
Tp57577_TGAC_v2_gene2168 2.0kb downstream 2.0kb downstream 5114 true Tp57577_TGAC_v2_LG3: 3523985-3529098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 3527099-3529098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 5.0kb upstream 5.0kb upstream 8114 true Tp57577_TGAC_v2_LG3: 3518985-3527098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 3518985-3523984 Trifolium pratense
Tp57577_TGAC_v2_gene2168 5.0kb downstream 5.0kb downstream 8114 true Tp57577_TGAC_v2_LG3: 3523985-3532098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 3527099-3532098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 10.0kb upstream 10.0kb upstream 13114 true Tp57577_TGAC_v2_LG3: 3513985-3527098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 3513985-3523984 Trifolium pratense
Tp57577_TGAC_v2_gene2168 10.0kb downstream 10.0kb downstream 13114 true Tp57577_TGAC_v2_LG3: 3523985-3537098 Trifolium pratense
Tp57577_TGAC_v2_gene2168 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 3527099-3537098 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309842 5265 Fabidae View MSA
124071262 5270 Rosid View MSA
123746571 5271 Pentapetalae View MSA
122793733 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain