Gene : Tp57577_TGAC_v2_gene12805 T. pratense v2
Defline:  (1 of 2) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  365
Name:  ? Tp57577_TGAC_v2_gene12805 Secondary Identifier:  ? PAC:35988820
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6842 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12805 0.5kb upstream 0.5kb upstream 3139 true Tp57577_TGAC_v2_LG3: 2807783-2810921 Trifolium pratense
Tp57577_TGAC_v2_gene12805 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 2810422-2810921 Trifolium pratense
Tp57577_TGAC_v2_gene12805 0.5kb downstream 0.5kb downstream 3139 true Tp57577_TGAC_v2_LG3: 2807283-2810421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 2807283-2807782 Trifolium pratense
Tp57577_TGAC_v2_gene12805 1.0kb upstream 1.0kb upstream 3639 true Tp57577_TGAC_v2_LG3: 2807783-2811421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 2810422-2811421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 1.0kb downstream 1.0kb downstream 3639 true Tp57577_TGAC_v2_LG3: 2806783-2810421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 2806783-2807782 Trifolium pratense
Tp57577_TGAC_v2_gene12805 2.0kb upstream 2.0kb upstream 4639 true Tp57577_TGAC_v2_LG3: 2807783-2812421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 2810422-2812421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 2.0kb downstream 2.0kb downstream 4639 true Tp57577_TGAC_v2_LG3: 2805783-2810421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 2805783-2807782 Trifolium pratense
Tp57577_TGAC_v2_gene12805 5.0kb upstream 5.0kb upstream 7639 true Tp57577_TGAC_v2_LG3: 2807783-2815421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 2810422-2815421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 5.0kb downstream 5.0kb downstream 7639 true Tp57577_TGAC_v2_LG3: 2802783-2810421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 2802783-2807782 Trifolium pratense
Tp57577_TGAC_v2_gene12805 10.0kb upstream 10.0kb upstream 12639 true Tp57577_TGAC_v2_LG3: 2807783-2820421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 2810422-2820421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 10.0kb downstream 10.0kb downstream 12639 true Tp57577_TGAC_v2_LG3: 2797783-2810421 Trifolium pratense
Tp57577_TGAC_v2_gene12805 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 2797783-2807782 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
122313467 5265 Fabidae View MSA
124063351 5270 Rosid View MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain