Gene : Tp57577_TGAC_v2_gene17542 T. pratense v2
Defline:  (1 of 17) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene17542 Secondary Identifier:  ? PAC:35961272
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17542 0.5kb upstream 0.5kb upstream 3659 true Tp57577_TGAC_v2_scaf_222: 60427-64085 Trifolium pratense
Tp57577_TGAC_v2_gene17542 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_222: 63586-64085 Trifolium pratense
Tp57577_TGAC_v2_gene17542 0.5kb downstream 0.5kb downstream 3659 true Tp57577_TGAC_v2_scaf_222: 59927-63585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_222: 59927-60426 Trifolium pratense
Tp57577_TGAC_v2_gene17542 1.0kb upstream 1.0kb upstream 4159 true Tp57577_TGAC_v2_scaf_222: 60427-64585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_222: 63586-64585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 1.0kb downstream 1.0kb downstream 4159 true Tp57577_TGAC_v2_scaf_222: 59427-63585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_222: 59427-60426 Trifolium pratense
Tp57577_TGAC_v2_gene17542 2.0kb upstream 2.0kb upstream 5159 true Tp57577_TGAC_v2_scaf_222: 60427-65585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_222: 63586-65585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 2.0kb downstream 2.0kb downstream 5159 true Tp57577_TGAC_v2_scaf_222: 58427-63585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_222: 58427-60426 Trifolium pratense
Tp57577_TGAC_v2_gene17542 5.0kb upstream 5.0kb upstream 8159 true Tp57577_TGAC_v2_scaf_222: 60427-68585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_222: 63586-68585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 5.0kb downstream 5.0kb downstream 8159 true Tp57577_TGAC_v2_scaf_222: 55427-63585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_222: 55427-60426 Trifolium pratense
Tp57577_TGAC_v2_gene17542 10.0kb upstream 10.0kb upstream 13159 true Tp57577_TGAC_v2_scaf_222: 60427-73585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_222: 63586-73585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 10.0kb downstream 10.0kb downstream 13159 true Tp57577_TGAC_v2_scaf_222: 50427-63585 Trifolium pratense
Tp57577_TGAC_v2_gene17542 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_222: 50427-60426 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780545 5273 Angiosperm View MSA
122301382 5265 Fabidae View MSA
124050263 5270 Rosid View MSA
123746693 5271 Pentapetalae View MSA
122772010 5272 Eudicot View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain