Gene : Tp57577_TGAC_v2_gene12282 T. pratense v2
Defline:  (1 of 3) K08238 - xyloglucan 6-xylosyltransferase [EC:2.4.2.39] Xyl a1-6 Glc (XXT) Genomic Order:  3348
Name:  ? Tp57577_TGAC_v2_gene12282 Secondary Identifier:  ? PAC:35988868
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5936 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12282 0.5kb upstream 0.5kb upstream 3882 true Tp57577_TGAC_v2_LG3: 28661456-28665337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 28661456-28661955 Trifolium pratense
Tp57577_TGAC_v2_gene12282 0.5kb downstream 0.5kb downstream 3882 true Tp57577_TGAC_v2_LG3: 28661956-28665837 Trifolium pratense
Tp57577_TGAC_v2_gene12282 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 28665338-28665837 Trifolium pratense
Tp57577_TGAC_v2_gene12282 1.0kb upstream 1.0kb upstream 4382 true Tp57577_TGAC_v2_LG3: 28660956-28665337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 28660956-28661955 Trifolium pratense
Tp57577_TGAC_v2_gene12282 1.0kb downstream 1.0kb downstream 4382 true Tp57577_TGAC_v2_LG3: 28661956-28666337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 28665338-28666337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 2.0kb upstream 2.0kb upstream 5382 true Tp57577_TGAC_v2_LG3: 28659956-28665337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 28659956-28661955 Trifolium pratense
Tp57577_TGAC_v2_gene12282 2.0kb downstream 2.0kb downstream 5382 true Tp57577_TGAC_v2_LG3: 28661956-28667337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 28665338-28667337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 5.0kb upstream 5.0kb upstream 8382 true Tp57577_TGAC_v2_LG3: 28656956-28665337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 28656956-28661955 Trifolium pratense
Tp57577_TGAC_v2_gene12282 5.0kb downstream 5.0kb downstream 8382 true Tp57577_TGAC_v2_LG3: 28661956-28670337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 28665338-28670337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 10.0kb upstream 10.0kb upstream 13382 true Tp57577_TGAC_v2_LG3: 28651956-28665337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 28651956-28661955 Trifolium pratense
Tp57577_TGAC_v2_gene12282 10.0kb downstream 10.0kb downstream 13382 true Tp57577_TGAC_v2_LG3: 28661956-28675337 Trifolium pratense
Tp57577_TGAC_v2_gene12282 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 28665338-28675337 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311174 5265 Fabidae View MSA
124066918 5270 Rosid View MSA
123741049 5271 Pentapetalae View MSA
122787674 5272 Eudicot View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain