Gene : Tp57577_TGAC_v2_gene21618 T. pratense v2
Defline:  (1 of 1) K13679 - granule-bound starch synthase [EC:2.4.1.242] Glc a1-4 Glc (WAXY) Genomic Order:  949
Name:  ? Tp57577_TGAC_v2_gene21618 Secondary Identifier:  ? PAC:35980011
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-622 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21618 0.5kb upstream 0.5kb upstream 5187 true Tp57577_TGAC_v2_LG1: 7461014-7466200 Trifolium pratense
Tp57577_TGAC_v2_gene21618 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 7465701-7466200 Trifolium pratense
Tp57577_TGAC_v2_gene21618 0.5kb downstream 0.5kb downstream 5187 true Tp57577_TGAC_v2_LG1: 7460514-7465700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 7460514-7461013 Trifolium pratense
Tp57577_TGAC_v2_gene21618 1.0kb upstream 1.0kb upstream 5687 true Tp57577_TGAC_v2_LG1: 7461014-7466700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 7465701-7466700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 1.0kb downstream 1.0kb downstream 5687 true Tp57577_TGAC_v2_LG1: 7460014-7465700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 7460014-7461013 Trifolium pratense
Tp57577_TGAC_v2_gene21618 2.0kb upstream 2.0kb upstream 6687 true Tp57577_TGAC_v2_LG1: 7461014-7467700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 7465701-7467700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 2.0kb downstream 2.0kb downstream 6687 true Tp57577_TGAC_v2_LG1: 7459014-7465700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 7459014-7461013 Trifolium pratense
Tp57577_TGAC_v2_gene21618 5.0kb upstream 5.0kb upstream 9687 true Tp57577_TGAC_v2_LG1: 7461014-7470700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 7465701-7470700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 5.0kb downstream 5.0kb downstream 9687 true Tp57577_TGAC_v2_LG1: 7456014-7465700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 7456014-7461013 Trifolium pratense
Tp57577_TGAC_v2_gene21618 10.0kb upstream 10.0kb upstream 14687 true Tp57577_TGAC_v2_LG1: 7461014-7475700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 7465701-7475700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 10.0kb downstream 10.0kb downstream 14687 true Tp57577_TGAC_v2_LG1: 7451014-7465700 Trifolium pratense
Tp57577_TGAC_v2_gene21618 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 7451014-7461013 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311550 5265 Fabidae View MSA
124071103 5270 Rosid View MSA
123740626 5271 Pentapetalae View MSA
122790728 5272 Eudicot View MSA
122042612 5273 Angiosperm View MSA
121345518 5274 Embryophyte View MSA
123424723 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain