Gene : Tp57577_TGAC_v2_gene11861 T. pratense v2
Defline:  (1 of 1) 2.7.1.148 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase / CMK Genomic Order:  1477
Name:  ? Tp57577_TGAC_v2_gene11861 Secondary Identifier:  ? PAC:35987621
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7560 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11861 0.5kb upstream 0.5kb upstream 5069 true Tp57577_TGAC_v2_LG3: 11871691-11876759 Trifolium pratense
Tp57577_TGAC_v2_gene11861 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 11876260-11876759 Trifolium pratense
Tp57577_TGAC_v2_gene11861 0.5kb downstream 0.5kb downstream 5069 true Tp57577_TGAC_v2_LG3: 11871191-11876259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 11871191-11871690 Trifolium pratense
Tp57577_TGAC_v2_gene11861 1.0kb upstream 1.0kb upstream 5569 true Tp57577_TGAC_v2_LG3: 11871691-11877259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 11876260-11877259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 1.0kb downstream 1.0kb downstream 5569 true Tp57577_TGAC_v2_LG3: 11870691-11876259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 11870691-11871690 Trifolium pratense
Tp57577_TGAC_v2_gene11861 2.0kb upstream 2.0kb upstream 6569 true Tp57577_TGAC_v2_LG3: 11871691-11878259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 11876260-11878259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 2.0kb downstream 2.0kb downstream 6569 true Tp57577_TGAC_v2_LG3: 11869691-11876259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 11869691-11871690 Trifolium pratense
Tp57577_TGAC_v2_gene11861 5.0kb upstream 5.0kb upstream 9569 true Tp57577_TGAC_v2_LG3: 11871691-11881259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 11876260-11881259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 5.0kb downstream 5.0kb downstream 9569 true Tp57577_TGAC_v2_LG3: 11866691-11876259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 11866691-11871690 Trifolium pratense
Tp57577_TGAC_v2_gene11861 10.0kb upstream 10.0kb upstream 14569 true Tp57577_TGAC_v2_LG3: 11871691-11886259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 11876260-11886259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 10.0kb downstream 10.0kb downstream 14569 true Tp57577_TGAC_v2_LG3: 11861691-11876259 Trifolium pratense
Tp57577_TGAC_v2_gene11861 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 11861691-11871690 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301142 5265 Fabidae View MSA
124062770 5270 Rosid View MSA
123737425 5271 Pentapetalae View MSA
122788330 5272 Eudicot View MSA
122044611 5273 Angiosperm View MSA
121345778 5274 Embryophyte View MSA
123424084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain