Gene : Tp57577_TGAC_v2_gene11875 T. pratense v2
Defline:  (1 of 1) PTHR10277:SF40 - PROTEIN Y71G12B.10 Genomic Order:  1495
Name:  ? Tp57577_TGAC_v2_gene11875 Secondary Identifier:  ? PAC:35990171
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LEU-DEG2-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11875 0.5kb upstream 0.5kb upstream 14583 true Tp57577_TGAC_v2_LG3: 12009189-12023771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 12009189-12009688 Trifolium pratense
Tp57577_TGAC_v2_gene11875 0.5kb downstream 0.5kb downstream 14583 true Tp57577_TGAC_v2_LG3: 12009689-12024271 Trifolium pratense
Tp57577_TGAC_v2_gene11875 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 12023772-12024271 Trifolium pratense
Tp57577_TGAC_v2_gene11875 1.0kb upstream 1.0kb upstream 15083 true Tp57577_TGAC_v2_LG3: 12008689-12023771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 12008689-12009688 Trifolium pratense
Tp57577_TGAC_v2_gene11875 1.0kb downstream 1.0kb downstream 15083 true Tp57577_TGAC_v2_LG3: 12009689-12024771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 12023772-12024771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 2.0kb upstream 2.0kb upstream 16083 true Tp57577_TGAC_v2_LG3: 12007689-12023771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 12007689-12009688 Trifolium pratense
Tp57577_TGAC_v2_gene11875 2.0kb downstream 2.0kb downstream 16083 true Tp57577_TGAC_v2_LG3: 12009689-12025771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 12023772-12025771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 5.0kb upstream 5.0kb upstream 19083 true Tp57577_TGAC_v2_LG3: 12004689-12023771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 12004689-12009688 Trifolium pratense
Tp57577_TGAC_v2_gene11875 5.0kb downstream 5.0kb downstream 19083 true Tp57577_TGAC_v2_LG3: 12009689-12028771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 12023772-12028771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 10.0kb upstream 10.0kb upstream 24083 true Tp57577_TGAC_v2_LG3: 11999689-12023771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 11999689-12009688 Trifolium pratense
Tp57577_TGAC_v2_gene11875 10.0kb downstream 10.0kb downstream 24083 true Tp57577_TGAC_v2_LG3: 12009689-12033771 Trifolium pratense
Tp57577_TGAC_v2_gene11875 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 12023772-12033771 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314208 5265 Fabidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain