Gene : Tp57577_TGAC_v2_gene11874 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1491
Name:  ? Tp57577_TGAC_v2_gene11874 Secondary Identifier:  ? PAC:35989413
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11874 0.5kb upstream 0.5kb upstream 4338 true Tp57577_TGAC_v2_LG3: 11977001-11981338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 11977001-11977500 Trifolium pratense
Tp57577_TGAC_v2_gene11874 0.5kb downstream 0.5kb downstream 4338 true Tp57577_TGAC_v2_LG3: 11977501-11981838 Trifolium pratense
Tp57577_TGAC_v2_gene11874 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 11981339-11981838 Trifolium pratense
Tp57577_TGAC_v2_gene11874 1.0kb upstream 1.0kb upstream 4838 true Tp57577_TGAC_v2_LG3: 11976501-11981338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 11976501-11977500 Trifolium pratense
Tp57577_TGAC_v2_gene11874 1.0kb downstream 1.0kb downstream 4838 true Tp57577_TGAC_v2_LG3: 11977501-11982338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 11981339-11982338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 2.0kb upstream 2.0kb upstream 5838 true Tp57577_TGAC_v2_LG3: 11975501-11981338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 11975501-11977500 Trifolium pratense
Tp57577_TGAC_v2_gene11874 2.0kb downstream 2.0kb downstream 5838 true Tp57577_TGAC_v2_LG3: 11977501-11983338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 11981339-11983338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 5.0kb upstream 5.0kb upstream 8838 true Tp57577_TGAC_v2_LG3: 11972501-11981338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 11972501-11977500 Trifolium pratense
Tp57577_TGAC_v2_gene11874 5.0kb downstream 5.0kb downstream 8838 true Tp57577_TGAC_v2_LG3: 11977501-11986338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 11981339-11986338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 10.0kb upstream 10.0kb upstream 13838 true Tp57577_TGAC_v2_LG3: 11967501-11981338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 11967501-11977500 Trifolium pratense
Tp57577_TGAC_v2_gene11874 10.0kb downstream 10.0kb downstream 13838 true Tp57577_TGAC_v2_LG3: 11977501-11991338 Trifolium pratense
Tp57577_TGAC_v2_gene11874 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 11981339-11991338 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303386 5265 Fabidae View MSA
124066157 5270 Rosid View MSA
123739123 5271 Pentapetalae View MSA
122794218 5272 Eudicot View MSA
122042407 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain