Gene : Tp57577_TGAC_v2_gene1926 T. pratense v2

Defline:  (1 of 2) PTHR31791:SF13 - FRIGIDA-LIKE PROTEIN 5 Genomic Order:  1674
Name:  ? Tp57577_TGAC_v2_gene1926 Secondary Identifier:  ? PAC:35978790

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1926 0.5kb upstream 0.5kb upstream 5114 true Tp57577_TGAC_v2_LG1: 13813512-13818625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 13813512-13814011 Trifolium pratense
Tp57577_TGAC_v2_gene1926 0.5kb downstream 0.5kb downstream 5114 true Tp57577_TGAC_v2_LG1: 13814012-13819125 Trifolium pratense
Tp57577_TGAC_v2_gene1926 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 13818626-13819125 Trifolium pratense
Tp57577_TGAC_v2_gene1926 1.0kb upstream 1.0kb upstream 5614 true Tp57577_TGAC_v2_LG1: 13813012-13818625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 13813012-13814011 Trifolium pratense
Tp57577_TGAC_v2_gene1926 1.0kb downstream 1.0kb downstream 5614 true Tp57577_TGAC_v2_LG1: 13814012-13819625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 13818626-13819625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 2.0kb upstream 2.0kb upstream 6614 true Tp57577_TGAC_v2_LG1: 13812012-13818625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 13812012-13814011 Trifolium pratense
Tp57577_TGAC_v2_gene1926 2.0kb downstream 2.0kb downstream 6614 true Tp57577_TGAC_v2_LG1: 13814012-13820625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 13818626-13820625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 5.0kb upstream 5.0kb upstream 9614 true Tp57577_TGAC_v2_LG1: 13809012-13818625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 13809012-13814011 Trifolium pratense
Tp57577_TGAC_v2_gene1926 5.0kb downstream 5.0kb downstream 9614 true Tp57577_TGAC_v2_LG1: 13814012-13823625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 13818626-13823625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 10.0kb upstream 10.0kb upstream 14614 true Tp57577_TGAC_v2_LG1: 13804012-13818625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 13804012-13814011 Trifolium pratense
Tp57577_TGAC_v2_gene1926 10.0kb downstream 10.0kb downstream 14614 true Tp57577_TGAC_v2_LG1: 13814012-13828625 Trifolium pratense
Tp57577_TGAC_v2_gene1926 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 13818626-13828625 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313510 5265 Fabidae View MSA
124072897 5270 Rosid View MSA
123741015 5271 Pentapetalae View MSA
122795482 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain