Gene : Tp57577_TGAC_v2_gene1912 T. pratense v2
Defline:  (1 of 2) K12666 - oligosaccharyltransferase complex subunit alpha (ribophorin I) (OST1, RPN1) Genomic Order:  1717
Name:  ? Tp57577_TGAC_v2_gene1912 Secondary Identifier:  ? PAC:35978539
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1912 0.5kb upstream 0.5kb upstream 7269 true Tp57577_TGAC_v2_LG1: 14152492-14159760 Trifolium pratense
Tp57577_TGAC_v2_gene1912 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 14159261-14159760 Trifolium pratense
Tp57577_TGAC_v2_gene1912 0.5kb downstream 0.5kb downstream 7269 true Tp57577_TGAC_v2_LG1: 14151992-14159260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 14151992-14152491 Trifolium pratense
Tp57577_TGAC_v2_gene1912 1.0kb upstream 1.0kb upstream 7769 true Tp57577_TGAC_v2_LG1: 14152492-14160260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 14159261-14160260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 1.0kb downstream 1.0kb downstream 7769 true Tp57577_TGAC_v2_LG1: 14151492-14159260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 14151492-14152491 Trifolium pratense
Tp57577_TGAC_v2_gene1912 2.0kb upstream 2.0kb upstream 8769 true Tp57577_TGAC_v2_LG1: 14152492-14161260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 14159261-14161260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 2.0kb downstream 2.0kb downstream 8769 true Tp57577_TGAC_v2_LG1: 14150492-14159260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 14150492-14152491 Trifolium pratense
Tp57577_TGAC_v2_gene1912 5.0kb upstream 5.0kb upstream 11769 true Tp57577_TGAC_v2_LG1: 14152492-14164260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 14159261-14164260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 5.0kb downstream 5.0kb downstream 11769 true Tp57577_TGAC_v2_LG1: 14147492-14159260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 14147492-14152491 Trifolium pratense
Tp57577_TGAC_v2_gene1912 10.0kb upstream 10.0kb upstream 16769 true Tp57577_TGAC_v2_LG1: 14152492-14169260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 14159261-14169260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 10.0kb downstream 10.0kb downstream 16769 true Tp57577_TGAC_v2_LG1: 14142492-14159260 Trifolium pratense
Tp57577_TGAC_v2_gene1912 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 14142492-14152491 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303975 5265 Fabidae View MSA
124062432 5270 Rosid View MSA
123739832 5271 Pentapetalae View MSA
122788147 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain