Gene : Tp57577_TGAC_v2_gene12112 T. pratense v2

Defline:  (1 of 3) PTHR19241:SF257 - ABC TRANSPORTER G FAMILY MEMBER 9 Genomic Order:  1314
Name:  ? Tp57577_TGAC_v2_gene12112 Secondary Identifier:  ? PAC:35988796

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12112 0.5kb upstream 0.5kb upstream 3818 true Tp57577_TGAC_v2_LG3: 10308056-10311873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 10308056-10308555 Trifolium pratense
Tp57577_TGAC_v2_gene12112 0.5kb downstream 0.5kb downstream 3818 true Tp57577_TGAC_v2_LG3: 10308556-10312373 Trifolium pratense
Tp57577_TGAC_v2_gene12112 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 10311874-10312373 Trifolium pratense
Tp57577_TGAC_v2_gene12112 1.0kb upstream 1.0kb upstream 4318 true Tp57577_TGAC_v2_LG3: 10307556-10311873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 10307556-10308555 Trifolium pratense
Tp57577_TGAC_v2_gene12112 1.0kb downstream 1.0kb downstream 4318 true Tp57577_TGAC_v2_LG3: 10308556-10312873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 10311874-10312873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 2.0kb upstream 2.0kb upstream 5318 true Tp57577_TGAC_v2_LG3: 10306556-10311873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 10306556-10308555 Trifolium pratense
Tp57577_TGAC_v2_gene12112 2.0kb downstream 2.0kb downstream 5318 true Tp57577_TGAC_v2_LG3: 10308556-10313873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 10311874-10313873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 5.0kb upstream 5.0kb upstream 8318 true Tp57577_TGAC_v2_LG3: 10303556-10311873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 10303556-10308555 Trifolium pratense
Tp57577_TGAC_v2_gene12112 5.0kb downstream 5.0kb downstream 8318 true Tp57577_TGAC_v2_LG3: 10308556-10316873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 10311874-10316873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 10.0kb upstream 10.0kb upstream 13318 true Tp57577_TGAC_v2_LG3: 10298556-10311873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 10298556-10308555 Trifolium pratense
Tp57577_TGAC_v2_gene12112 10.0kb downstream 10.0kb downstream 13318 true Tp57577_TGAC_v2_LG3: 10308556-10321873 Trifolium pratense
Tp57577_TGAC_v2_gene12112 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 10311874-10321873 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303638 5265 Fabidae View MSA
124060493 5270 Rosid View MSA
123736406 5271 Pentapetalae View MSA
122787150 5272 Eudicot View MSA
122048442 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121348566 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain