Gene : Tp57577_TGAC_v2_gene11918 T. pratense v2
Defline:  (1 of 2) PTHR22835//PTHR22835:SF267 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1459
Name:  ? Tp57577_TGAC_v2_gene11918 Secondary Identifier:  ? PAC:35989640
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPAS-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11918 0.5kb upstream 0.5kb upstream 4227 true Tp57577_TGAC_v2_LG3: 11679932-11684158 Trifolium pratense
Tp57577_TGAC_v2_gene11918 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 11683659-11684158 Trifolium pratense
Tp57577_TGAC_v2_gene11918 0.5kb downstream 0.5kb downstream 4227 true Tp57577_TGAC_v2_LG3: 11679432-11683658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 11679432-11679931 Trifolium pratense
Tp57577_TGAC_v2_gene11918 1.0kb upstream 1.0kb upstream 4727 true Tp57577_TGAC_v2_LG3: 11679932-11684658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 11683659-11684658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 1.0kb downstream 1.0kb downstream 4727 true Tp57577_TGAC_v2_LG3: 11678932-11683658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 11678932-11679931 Trifolium pratense
Tp57577_TGAC_v2_gene11918 2.0kb upstream 2.0kb upstream 5727 true Tp57577_TGAC_v2_LG3: 11679932-11685658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 11683659-11685658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 2.0kb downstream 2.0kb downstream 5727 true Tp57577_TGAC_v2_LG3: 11677932-11683658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 11677932-11679931 Trifolium pratense
Tp57577_TGAC_v2_gene11918 5.0kb upstream 5.0kb upstream 8727 true Tp57577_TGAC_v2_LG3: 11679932-11688658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 11683659-11688658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 5.0kb downstream 5.0kb downstream 8727 true Tp57577_TGAC_v2_LG3: 11674932-11683658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 11674932-11679931 Trifolium pratense
Tp57577_TGAC_v2_gene11918 10.0kb upstream 10.0kb upstream 13727 true Tp57577_TGAC_v2_LG3: 11679932-11693658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 11683659-11693658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 10.0kb downstream 10.0kb downstream 13727 true Tp57577_TGAC_v2_LG3: 11669932-11683658 Trifolium pratense
Tp57577_TGAC_v2_gene11918 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 11669932-11679931 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300197 5265 Fabidae View MSA
124065806 5270 Rosid View MSA
123747165 5271 Pentapetalae View MSA
122791413 5272 Eudicot View MSA
122042370 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain