Gene : Tp57577_TGAC_v2_gene11943 T. pratense v2
Defline:  (1 of 4) PTHR24015:SF884 - PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN Genomic Order:  1551
Name:  ? Tp57577_TGAC_v2_gene11943 Secondary Identifier:  ? PAC:35989689
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11943 0.5kb upstream 0.5kb upstream 2624 true Tp57577_TGAC_v2_LG3: 12353334-12355957 Trifolium pratense
Tp57577_TGAC_v2_gene11943 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 12355458-12355957 Trifolium pratense
Tp57577_TGAC_v2_gene11943 0.5kb downstream 0.5kb downstream 2624 true Tp57577_TGAC_v2_LG3: 12352834-12355457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 12352834-12353333 Trifolium pratense
Tp57577_TGAC_v2_gene11943 1.0kb upstream 1.0kb upstream 3124 true Tp57577_TGAC_v2_LG3: 12353334-12356457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 12355458-12356457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 1.0kb downstream 1.0kb downstream 3124 true Tp57577_TGAC_v2_LG3: 12352334-12355457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 12352334-12353333 Trifolium pratense
Tp57577_TGAC_v2_gene11943 2.0kb upstream 2.0kb upstream 4124 true Tp57577_TGAC_v2_LG3: 12353334-12357457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 12355458-12357457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 2.0kb downstream 2.0kb downstream 4124 true Tp57577_TGAC_v2_LG3: 12351334-12355457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 12351334-12353333 Trifolium pratense
Tp57577_TGAC_v2_gene11943 5.0kb upstream 5.0kb upstream 7124 true Tp57577_TGAC_v2_LG3: 12353334-12360457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 12355458-12360457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 5.0kb downstream 5.0kb downstream 7124 true Tp57577_TGAC_v2_LG3: 12348334-12355457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 12348334-12353333 Trifolium pratense
Tp57577_TGAC_v2_gene11943 10.0kb upstream 10.0kb upstream 12124 true Tp57577_TGAC_v2_LG3: 12353334-12365457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 12355458-12365457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 10.0kb downstream 10.0kb downstream 12124 true Tp57577_TGAC_v2_LG3: 12343334-12355457 Trifolium pratense
Tp57577_TGAC_v2_gene11943 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 12343334-12353333 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313793 5265 Fabidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain