Gene : Tp57577_TGAC_v2_gene11949 T. pratense v2
Defline:  (1 of 39) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  1455
Name:  ? Tp57577_TGAC_v2_gene11949 Secondary Identifier:  ? PAC:35988509
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11949 0.5kb upstream 0.5kb upstream 2713 true Tp57577_TGAC_v2_LG3: 11555489-11558201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 11555489-11555988 Trifolium pratense
Tp57577_TGAC_v2_gene11949 0.5kb downstream 0.5kb downstream 2713 true Tp57577_TGAC_v2_LG3: 11555989-11558701 Trifolium pratense
Tp57577_TGAC_v2_gene11949 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 11558202-11558701 Trifolium pratense
Tp57577_TGAC_v2_gene11949 1.0kb upstream 1.0kb upstream 3213 true Tp57577_TGAC_v2_LG3: 11554989-11558201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 11554989-11555988 Trifolium pratense
Tp57577_TGAC_v2_gene11949 1.0kb downstream 1.0kb downstream 3213 true Tp57577_TGAC_v2_LG3: 11555989-11559201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 11558202-11559201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 2.0kb upstream 2.0kb upstream 4213 true Tp57577_TGAC_v2_LG3: 11553989-11558201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 11553989-11555988 Trifolium pratense
Tp57577_TGAC_v2_gene11949 2.0kb downstream 2.0kb downstream 4213 true Tp57577_TGAC_v2_LG3: 11555989-11560201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 11558202-11560201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 5.0kb upstream 5.0kb upstream 7213 true Tp57577_TGAC_v2_LG3: 11550989-11558201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 11550989-11555988 Trifolium pratense
Tp57577_TGAC_v2_gene11949 5.0kb downstream 5.0kb downstream 7213 true Tp57577_TGAC_v2_LG3: 11555989-11563201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 11558202-11563201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 10.0kb upstream 10.0kb upstream 12213 true Tp57577_TGAC_v2_LG3: 11545989-11558201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 11545989-11555988 Trifolium pratense
Tp57577_TGAC_v2_gene11949 10.0kb downstream 10.0kb downstream 12213 true Tp57577_TGAC_v2_LG3: 11555989-11568201 Trifolium pratense
Tp57577_TGAC_v2_gene11949 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 11558202-11568201 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313944 5265 Fabidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain